DMCA
HTSstation: a web application and open-access libraries for high-throughput sequencing data analysis (2014)
| Venue: | PLoS ONE |
| Citations: | 3 - 0 self |
BibTeX
@ARTICLE{David14htsstation:a,
author = {Fabrice P. A. David and Julien Delafontaine and Solenne Carat and Frederick J. Ross and Gregory Lefebvre and Yohan Jarosz and Lucas Sinclair and Daan Noordermeer},
title = {HTSstation: a web application and open-access libraries for high-throughput sequencing data analysis},
journal = {PLoS ONE},
year = {2014},
pages = {85879}
}
Share
 |
 |
 |
 |
||
OpenURL
Abstract
The HTSstation analysis portal is a suite of simple web forms coupled to modular analysis pipelines for various applications of High-Throughput Sequencing including ChIP-seq, RNA-seq, 4C-seq and re-sequencing. HTSstation offers biologists the possibility to rapidly investigate their HTS data using an intuitive web application with heuristically pre-defined parameters. A number of open-source software components have been implemented and can be used to build, configure and run HTS analysis pipelines reactively. Besides, our programming framework empowers developers with the possibility to design their own workflows and integrate additional third-party software. The HTSstation web application is accessible at
