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Shi-jie Chen

Affiliation	Dept. of Physics and Dept. of Biochemistry, University of Missouri, Columbia
Publications	25
H-index	5

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#Cited
41	Predicting RNA pseudoknot folding thermodynamics - Nucleic Acids Res - 2006
27	Predicting RNA folding thermodynamics with a reduced chain representation model - RNA - 2005
8	Predicting secondary structural folding kinetics for nucleic acids - Biophys. J - 2010
8	Predicting ion binding properties for RNA tertiary structures - Biophys. J. 2010
7	Predicting ribosomal frameshifting efficiency. Phys. Biol - - 2008
5	Salt Contribution to RNA Tertiary Structure Folding Stability -
2	Folding Kinetics for the Conformational Switch between Alternative RNA Structures - - 2010
1	Kinetic Mechanism of Conformational Switch between Bistable RNA -
1	Vfold: A Web Server for RNA Structure and Folding Thermodynamics Prediction - - 2014
1	Ion-mediated RNA Structural Collapse: Effect of Spatial Confinement - Biophys. J. 2012
1	Predicting Ion-Nucleic Acid Interactions by Energy Landscape-Guided Sampling - J. Chem. Theory Comput. 2012
1	Coarse-Grained Prediction of RNA Loop Structures - - 2012
1	3Importance of Diffuse Metal Ion Binding to RNA -
	References -
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	References -
	Quantifying Coulombic and Solvent Polarization-Mediated Forces Between DNA Helices -
	RESEARCH ARTICLE TBI Server: A Web Server for Predicting Ion Effects in RNA Folding - - 1371
	doi:10.1093/nar/gkl346 Predicting RNA pseudoknot folding thermodynamics - - 2006
	with application to HIV dimerization initiation signal -