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720
OPTICS: Ordering Points To Identify the Clustering Structure
, 1999
"... Cluster analysis is a primary method for database mining. It is either used as a standalone tool to get insight into the distribution of a data set, e.g. to focus further analysis and data processing, or as a preprocessing step for other algorithms operating on the detected clusters. Almost all of ..."
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Cited by 511 (49 self)
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Cluster analysis is a primary method for database mining. It is either used as a standalone tool to get insight into the distribution of a data set, e.g. to focus further analysis and data processing, or as a preprocessing step for other algorithms operating on the detected clusters. Almost all of the wellknown clustering algorithms require input parameters which are hard to determine but have a significant influence on the clustering result. Furthermore, for many realdata sets there does not even exist a global parameter setting for which the result of the clustering algorithm describes the intrinsic clustering structure accurately. We introduce a new algorithm for the purpose of cluster analysis which does not produce a clustering of a data set explicitly; but instead creates an augmented ordering of the database representing its densitybased clustering structure. This clusterordering contains information which is equivalent to the densitybased clusterings corresponding to a broad range of parameter settings. It is a versatile basis for both automatic and interactive cluster analysis. We show how to automatically and efficiently extract not only ‘traditional ’ clustering information (e.g. representative points, arbitrary shaped clusters), but also the intrinsic clustering structure. For medium sized data sets, the clusterordering can be represented graphically and for very large data sets, we introduce an appropriate visualization technique. Both are suitable for interactive exploration of the intrinsic clustering structure offering additional insights into the distribution and correlation of the data.
LOF: Identifying DensityBased Local Outliers
 PROCEEDINGS OF THE 2000 ACM SIGMOD INTERNATIONAL CONFERENCE ON MANAGEMENT OF DATA
, 2000
"... For many KDD applications, such as detecting criminal activities in Ecommerce, finding the rare instances or the outliers, can be more interesting than finding the common patterns. Existing work in outlier detection regards being an outlier as a binary property. In this paper, we contend that for m ..."
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Cited by 499 (14 self)
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For many KDD applications, such as detecting criminal activities in Ecommerce, finding the rare instances or the outliers, can be more interesting than finding the common patterns. Existing work in outlier detection regards being an outlier as a binary property. In this paper, we contend that for many scenarios, it is more meaningful to assign to each object a degree of being an outlier. This degree is called the local outlier factor (LOF) of an object. It is local in that the degree depends on how isolated the object is with respect to the surrounding neighborhood. We give a detailed formal analysis showing that LOF enjoys many desirable properties. Using realworld datasets, we demonstrate that LOF can be used to find outliers which appear to be meaningful, but can otherwise not be identified with existing approaches. Finally, a careful performance evaluation of our algorithm confirms we show that our approach of finding local outliers can be practical.
Survey of clustering algorithms
 IEEE TRANSACTIONS ON NEURAL NETWORKS
, 2005
"... Data analysis plays an indispensable role for understanding various phenomena. Cluster analysis, primitive exploration with little or no prior knowledge, consists of research developed across a wide variety of communities. The diversity, on one hand, equips us with many tools. On the other hand, the ..."
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Cited by 483 (4 self)
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Data analysis plays an indispensable role for understanding various phenomena. Cluster analysis, primitive exploration with little or no prior knowledge, consists of research developed across a wide variety of communities. The diversity, on one hand, equips us with many tools. On the other hand, the profusion of options causes confusion. We survey clustering algorithms for data sets appearing in statistics, computer science, and machine learning, and illustrate their applications in some benchmark data sets, the traveling salesman problem, and bioinformatics, a new field attracting intensive efforts. Several tightly related topics, proximity measure, and cluster validation, are also discussed.
Biclustering algorithms for biological data analysis: a survey
 IEEE/ACM Transactions on Computational Biology and Bioinformatics
, 2004
"... Abstract—A large number of clustering approaches have been proposed for the analysis of gene expression data obtained from microarray experiments. However, the results from the application of standard clustering methods to genes are limited. This limitation is imposed by the existence of a number of ..."
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Cited by 481 (15 self)
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Abstract—A large number of clustering approaches have been proposed for the analysis of gene expression data obtained from microarray experiments. However, the results from the application of standard clustering methods to genes are limited. This limitation is imposed by the existence of a number of experimental conditions where the activity of genes is uncorrelated. A similar limitation exists when clustering of conditions is performed. For this reason, a number of algorithms that perform simultaneous clustering on the row and column dimensions of the data matrix has been proposed. The goal is to find submatrices, that is, subgroups of genes and subgroups of conditions, where the genes exhibit highly correlated activities for every condition. In this paper, we refer to this class of algorithms as biclustering. Biclustering is also referred in the literature as coclustering and direct clustering, among others names, and has also been used in fields such as information retrieval and data mining. In this comprehensive survey, we analyze a large number of existing approaches to biclustering, and classify them in accordance with the type of biclusters they can find, the patterns of biclusters that are discovered, the methods used to perform the search, the approaches used to evaluate the solution, and the target applications. Index Terms—Biclustering, simultaneous clustering, coclustering, subspace clustering, bidimensional clustering, direct clustering, block clustering, twoway clustering, twomode clustering, twosided clustering, microarray data analysis, biological data analysis, gene expression data. 1
Survey of clustering data mining techniques
, 2002
"... Accrue Software, Inc. Clustering is a division of data into groups of similar objects. Representing the data by fewer clusters necessarily loses certain fine details, but achieves simplification. It models data by its clusters. Data modeling puts clustering in a historical perspective rooted in math ..."
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Cited by 400 (0 self)
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Accrue Software, Inc. Clustering is a division of data into groups of similar objects. Representing the data by fewer clusters necessarily loses certain fine details, but achieves simplification. It models data by its clusters. Data modeling puts clustering in a historical perspective rooted in mathematics, statistics, and numerical analysis. From a machine learning perspective clusters correspond to hidden patterns, the search for clusters is unsupervised learning, and the resulting system represents a data concept. From a practical perspective clustering plays an outstanding role in data mining applications such as scientific data exploration, information retrieval and text mining, spatial database applications, Web analysis, CRM, marketing, medical diagnostics, computational biology, and many others. Clustering is the subject of active research in several fields such as statistics, pattern recognition, and machine learning. This survey focuses on clustering in data mining. Data mining adds to clustering the complications of very large datasets with very many attributes of different types. This imposes unique
Approximation Algorithms for Projective Clustering
 Proceedings of the ACM SIGMOD International Conference on Management of data, Philadelphia
, 2000
"... We consider the following two instances of the projective clustering problem: Given a set S of n points in R d and an integer k ? 0; cover S by k hyperstrips (resp. hypercylinders) so that the maximum width of a hyperstrip (resp., the maximum diameter of a hypercylinder) is minimized. Let w ..."
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Cited by 302 (21 self)
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We consider the following two instances of the projective clustering problem: Given a set S of n points in R d and an integer k ? 0; cover S by k hyperstrips (resp. hypercylinders) so that the maximum width of a hyperstrip (resp., the maximum diameter of a hypercylinder) is minimized. Let w be the smallest value so that S can be covered by k hyperstrips (resp. hypercylinders), each of width (resp. diameter) at most w : In the plane, the two problems are equivalent. It is NPHard to compute k planar strips of width even at most Cw ; for any constant C ? 0 [50]. This paper contains four main results related to projective clustering: (i) For d = 2, we present a randomized algorithm that computes O(k log k) strips of width at most 6w that cover S. Its expected running time is O(nk 2 log 4 n) if k 2 log k n; it also works for larger values of k, but then the expected running time is O(n 2=3 k 8=3 log 4 n). We also propose another algorithm that computes a c...
Data Clustering: 50 Years Beyond KMeans
, 2008
"... Organizing data into sensible groupings is one of the most fundamental modes of understanding and learning. As an example, a common scheme of scientific classification puts organisms into taxonomic ranks: domain, kingdom, phylum, class, etc.). Cluster analysis is the formal study of algorithms and m ..."
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Cited by 274 (6 self)
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Organizing data into sensible groupings is one of the most fundamental modes of understanding and learning. As an example, a common scheme of scientific classification puts organisms into taxonomic ranks: domain, kingdom, phylum, class, etc.). Cluster analysis is the formal study of algorithms and methods for grouping, or clustering, objects according to measured or perceived intrinsic characteristics or similarity. Cluster analysis does not use category labels that tag objects with prior identifiers, i.e., class labels. The absence of category information distinguishes data clustering (unsupervised learning) from classification or discriminant analysis (supervised learning). The aim of clustering is exploratory in nature to find structure in data. Clustering has a long and rich history in a variety of scientific fields. One of the most popular and simple clustering algorithms, Kmeans, was first published in 1955. In spite of the fact that Kmeans was proposed over 50 years ago and thousands of clustering algorithms have been published since then, Kmeans is still widely used. This speaks to the difficulty of designing a general purpose clustering algorithm and the illposed problem of clustering. We provide a brief overview of clustering, summarize well known clustering methods, discuss the major challenges and key issues in designing clustering algorithms, and point out some of the emerging and useful research directions, including semisupervised clustering, ensemble clustering, simultaneous feature selection, and data clustering and large scale data clustering.
Subspace clustering for high dimensional data: a review
 ACM SIGKDD Explorations Newsletter
, 2004
"... Subspace clustering for high dimensional data: ..."
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Outlier detection for high dimensional data
, 2001
"... The outlier detection problem has important applications in the eld of fraud detection, netw ork robustness analysis, and intrusion detection. Most suc h applications are high dimensional domains in whic hthe data can con tain hundreds of dimensions. Many recen t algorithms use concepts of pro ximit ..."
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Cited by 227 (4 self)
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The outlier detection problem has important applications in the eld of fraud detection, netw ork robustness analysis, and intrusion detection. Most suc h applications are high dimensional domains in whic hthe data can con tain hundreds of dimensions. Many recen t algorithms use concepts of pro ximity in order to nd outliers based on their relationship to the rest of the data. Ho w ever, in high dimensional space, the data is sparse and the notion of proximity fails to retain its meaningfulness. In fact, the sparsity of high dimensional data implies that every point is an almost equally good outlier from the perspective ofproximitybased de nitions. Consequently, for high dimensional data, the notion of nding meaningful outliers becomes substantially more complex and nonobvious. In this paper, w e discuss new techniques for outlier detection whic h nd the outliers by studying the behavior of projections from the data set. 1.
Finding Generalized Projected Clusters in High Dimensional Spaces
"... High dimensional data has always been a challenge for clustering algorithms because of the inherent sparsity of the points. Recent research results indicate that in high dimensional data, even the concept of proximity or clustering may not be meaningful. We discuss very general techniques for projec ..."
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Cited by 195 (8 self)
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High dimensional data has always been a challenge for clustering algorithms because of the inherent sparsity of the points. Recent research results indicate that in high dimensional data, even the concept of proximity or clustering may not be meaningful. We discuss very general techniques for projected clustering which are able to construct clusters in arbitrarily aligned subspaces of lower dimensionality. The subspaces are specific to the clusters themselves. This definition is substantially more general and realistic than currently available techniques which limit the method to only projections from the original set of attributes. The generalized projected clustering technique may also be viewed as a way of trying to rede ne clustering for high dimensional applications by searching for hidden subspaces with clusters which are created by interattribute correlations. We provide a new concept of using extended cluster feature vectors in order to make the algorithm scalable for very large databases. The running time and space requirements of the algorithm are adjustable, and are likely to tradeoff with better accuracy.