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Biochemical Limitations to Carbon Assimilation in C3 Plants—A retrospective analysis of the A/Cj curves from 109 species. (1993)

by S T Wullschleger
Venue:J. Exp. Bot.,
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2001. Photosynthetic acclimation of plants to growth irradiance: the relative importance of specific leaf area and nitrogen partitioning in maximizing carbon gain. Plant, Cell and Environment 24:755767

by J. R. Evans, H. Poorter
"... Photosynthetic acclimation of plants to growth irradiance: the relative importance of specific leaf area and nitrogen partitioning in maximizing carbon gain ..."
Abstract - Cited by 46 (2 self) - Add to MetaCart
Photosynthetic acclimation of plants to growth irradiance: the relative importance of specific leaf area and nitrogen partitioning in maximizing carbon gain
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...o be relatively constant when nitrogen content per unit leaf area varies (von Caemmerer & Farquhar 1981; Evans 1983), or across growth irradiance treatments (Sims & Pearcy 1989; Thompson et al. 1992; =-=Wullschleger 1993-=-; Evans 1996). It has also been observed Figure 9. Contour plots of the relative rate of photosynthesis persunit leaf dry mass under (a) low light (200 mmol m-2 s-1) and (b)shigh light (1000 mmol m-2 ...

Predicting gross primary productivity in terrestrial ecosystems

by Mathew Williams , Edward B Rastetter , David N Fernandes , Michael L Goulden , Gaius R Shaver , Loretta C Johnson - Ecological Applications , 1997
"... Abstract. Our goal was to construct a simple, highly aggregated model, driven by easily available data sets, that accurately predicted terrestrial gross primary productivity (GPP; carboxylation plus oxygenation) in diverse environments and ecosystems. Our starting point was a fine-scale, multilayer ..."
Abstract - Cited by 36 (7 self) - Add to MetaCart
Abstract. Our goal was to construct a simple, highly aggregated model, driven by easily available data sets, that accurately predicted terrestrial gross primary productivity (GPP; carboxylation plus oxygenation) in diverse environments and ecosystems. Our starting point was a fine-scale, multilayer model of half-hourly canopy processes that has been parametrized for Harvard Forest, Massachusetts. Over varied growing season conditions, this fine-scale model predicted hourly carbon and latent energy fluxes that were in good agreement with data from eddy covariance studies. Using an heuristic process, we derived a simple aggregated set of equations operating on cumulative or average values of the most sensitive driving variables (leaf area index, mean foliar N concentration, canopy height, average daily temperature and temperature range, atmospheric transmittance, latitude, day of year, atmospheric CO 2 concentration, and an index of soil moisture). We calibrated the aggregated model to provide estimates of GPP similar to those of the fine-scale model across a wide range of these driving variables. Our calibration across this broad range of conditions captured 96% of fine-scale model behavior, but was computationally many orders of magnitude faster. We then tested the assumptions we had made in generating the aggregated model by applying it in different ecosystems. Using the same parameter values derived for Harvard Forest, the aggregated model made sound predictions of GPP for wetsedge tundra in the Arctic under a variety of experimental manipulations, and also for a range of forest types across the OTTER (Oregon Transect Ecosystem Research) transect in Oregon, running from coastal Sitka spruce to high-plateau mountain juniper.
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...ynthesis model (1982), and mesophyll conductance. The aggregated model has dispensed with this detail to a great degree. We can hypothesize that variables have been discarded for either of two reasons: (1) The variable covaries strongly with another variable—only one of the two is required, or (2) GPP is not sensitive to variation in the parameter, so it can be discarded. As an example of the first case, we would expect 892 MATHEW WILLIAMS ET AL. Ecological Applications Vol. 7, No. 3 GPP to be highly sensitive to variations in the photosynthetic parameters, which vary greatly between species (Wullschleger 1993). However, the aggregation procedure has managed to effectively capture the essential relationship between foliar N concentration and metabolic limits on photosynthesis. The model can be driven with foliar N data, and the more complex facets of metabolic C fixation and their associated variables can be ignored. This is demonstrated by the applicability of the model to ecosystems with very different species composition. In the second case, there are indications that the sensitivity of the fine-scale model to some variables is relatively small. For example, we would expect coniferous forests to ...

Uncertainties in global terrestrial biosphere modeling: 1. A comprehensive sensitivity analysis with a new photosynthesis and energy balance scheme

by Wolfgang Knorr, et al. , 2001
"... ..."
Abstract - Cited by 29 (4 self) - Add to MetaCart
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2007), An improved canopy integration scheme for a land surface model with prognostic canopy structure

by Peter E. Thornton, Niklaus E. Zimmermann - J. Climate
"... A new logical framework relating the structural and functional characteristics of a vegetation canopy is presented, based on the hypothesis that the ratio of leaf area to leaf mass (specific leaf area) varies linearly with overlying leaf area index within the canopy. Measurements of vertical gradien ..."
Abstract - Cited by 23 (4 self) - Add to MetaCart
A new logical framework relating the structural and functional characteristics of a vegetation canopy is presented, based on the hypothesis that the ratio of leaf area to leaf mass (specific leaf area) varies linearly with overlying leaf area index within the canopy. Measurements of vertical gradients in specific leaf area and leaf carbon:nitrogen ratio for five species (two deciduous and three evergreen) in a temperate climate support this hypothesis. This new logic is combined with a two-leaf (sunlit and shaded) canopy model to arrive at a new canopy integration scheme for use in the land surface component of a climate system model. An inconsistency in the released model radiation code is identified and corrected. Also introduced here is a prognostic canopy model with coupled carbon and nitrogen cycle dynamics. The new scheme is imple-mented within the Community Land Model and tested in both diagnostic and prognostic canopy modes. The new scheme increases global gross primary production by 66 % (from 65 to 108 Pg carbon yr1) for diagnostic model simulations driven with reanalysis surface weather, with similar results (117 PgC yr1) for the new prognostic model. Comparison of model predictions to global syntheses of observations shows generally good agreement for net primary productivity (NPP) across a range of vegetation types, with likely underestimation of NPP in tundra and larch communities. Vegetation carbon stocks are higher than ob-served in forest systems, but the ranking of stocks by vegetation type is accurately captured. 1.
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...iables FNR and aR are assumed to be fundamental properties of the enzyme, and we treat them as constants for all plant types. Both FLNR and CNL are known to vary among plant types (Field et al. 1983; =-=Wullschleger 1993-=-), but, as cited above, there is evidence that they vary little with canopy depth for a given plant type. We therefore assume that most of the variation in Vcmax with x will result from variation in S...

Nitrogen controls on climate model evapotranspiration

by Robert E Dickinson , Joseph A Berry , Gordon B Bonan , # G James Collatz , Christopher B Field , Inez Y Fung , Michael Goulden , William A Hoffmann , ## Robert B Jackson , Ranga Myneni , @@ Piers , J Sellers , Muhammad Shaikh - J. Clim , 2002
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Abstract - Cited by 12 (0 self) - Add to MetaCart
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...d Evans (1998) and differ somewhat from the ‘‘Collatz–Bonan’’ values we previously adopted. Because these parameters are rather uncertain, at most one decimal place of accuracy is possible. The lc term will typically be about 2. The last term needed we, sometimes referred to as the ‘‘export-limited rate’’ represents the rate at which triphosphate can be utilized, and so metabolized sugars exported and the initial ribulose reconstituted. It is assumed to be the same as used by Collatz et al. (1991), and Bonan (1995): w 5 0.5 V .e m (10) The numerical factor is known to lie between 1/3 and 1/2. Wullschleger (1993) reviews a wide range of measurements for Vm and triphosphate ‘‘utilization’’ (TPU), giving average values of Vm of 75 mmoles m22 s21 for annuals, 44 mmoles m22 s21 for perennials, and an average triphosphate utilization of 10.1 mmoles m22 s21. Hence, simply averaging the annual and perennial rates and taking we as 3 3 TPU gives we ø 0.5 Vm. Foley et al. (1996) argue for a somewhat smaller value, apparently based on a different averaging approach with the same data. As evident from Eqs. (7)–(8), this term should become rate limiting, when T drops below 58– 108C. A smaller value would raise the...

Correspondence

by Simon J. Walker, Thomas A. Schlacher, Monika A. Schlacher-hoenlinger, Simon J. Walker, Centre For , 2007
"... Spatial heterogeneity of epibenthos on artificial reefs: fouling communities in the early stages of colonization ..."
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Spatial heterogeneity of epibenthos on artificial reefs: fouling communities in the early stages of colonization
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...demonstrated considerable improvements to model predictions of carbon fluxes in the Amazon when leaf P was taken into account. Empirically, there is also a strong relationship between Jmax and Vcmax (=-=Wullschleger 1993-=-; Beerling and Quick 1995), and most TBMs simulate Jmax as a linear function of Vcmax. However, this assumption could be erroneous because the correlation between Jmax and Vcmax is likely to be influe...

Biotic stress globally downregulates photosynthesis genes. Plant Cell Environ

by Damla D. Bilgin, Jorge A. Zavala, Jin Zhu, Steven J. Clough, Donald R. Ort, Evan H. Delucia
"... To determine if damage to foliage by biotic agents, including arthropods, fungi, bacteria and viral pathogens, universally downregulates the expression of genes involved in photosynthesis, we compared transcriptome data from microarray experiments after twenty two different forms of biotic damage on ..."
Abstract - Cited by 8 (0 self) - Add to MetaCart
To determine if damage to foliage by biotic agents, including arthropods, fungi, bacteria and viral pathogens, universally downregulates the expression of genes involved in photosynthesis, we compared transcriptome data from microarray experiments after twenty two different forms of biotic damage on eight different plant species. Transcript levels of photosynthesis light reaction, carbon reduction cycle and pigment synthesis genes decreased regardless of the type of biotic attack. The corresponding upregulation of genes coding for the synthesis of jasmonic acid and those involved in the responses to salicylic acid and ethylene suggest that the downregulation of photosynthesis-related genes was part of a defence response. Analysis of the subcellular targeting of co-expressed gene clusters revealed that the transcript levels of 84 % of the genes that carry a chloroplast targeting peptide sequence decreased. The majority of these downregulated genes shared common regulatory elements, such as G-box (CACGTG), T-box (ACTTTG) and SORLIP (GCCAC) motifs. Strong convergence in the response of transcription suggests that the universal downregulation of photosynthesis-related gene expression is an adaptive response to biotic attack. We hypothesize that slow turnover of many photosynthetic proteins allows plants to invest resources in immediate defence needs without debilitating near term losses in photosynthetic capacity. Key-words: chloroplast; cis-regulatory elements; defence; gene expression; microarray.
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...bution between reaction centres, and precise coordination between the production of reductant and ATP from the light reactions and its consumption and subsequent reduction of CO2 in the Calvin cycle (=-=Wullschleger 1993-=-; Walters 2004) ensure homeostasis of photosynthetic processes when faced with changing environmental conditions. Similar responses for light reaction and Calvin cycle gene expression suggest that the...

Ecosystem processes at the watershed scale: extending optimality theory from plot to catchment

by Taehee Hwang , Lawrence Band , T C Hales - Water Resources Research , 2009
"... [1] The adjustment of local vegetation conditions to limiting soil water by either maximizing productivity or minimizing water stress has been an area of central interest in ecohydrology since Eagleson's classic study. This work has typically been limited to consider one-dimensional exchange a ..."
Abstract - Cited by 8 (0 self) - Add to MetaCart
[1] The adjustment of local vegetation conditions to limiting soil water by either maximizing productivity or minimizing water stress has been an area of central interest in ecohydrology since Eagleson's classic study. This work has typically been limited to consider one-dimensional exchange and cycling within patches and has not incorporated the effects of lateral redistribution of soil moisture, coupled ecosystem carbon and nitrogen cycling, and vegetation allocation processes along topographic gradients. We extend this theory to the hillslope and catchment scale, with in situ and downslope feedbacks between water, carbon and nutrient cycling within a fully transient, distributed model. We explore whether ecosystem patches linked along hydrologic flow paths as a catena evolve to form an emergent pattern optimized to local climate and topographic conditions. Lateral hydrologic connectivity of a small catchment is calibrated with streamflow data and further tested with measured soil moisture patterns. Then, the spatial gradient of vegetation density within a small catchment estimated with fine-resolution satellite imagery and field measurements is evaluated with simulated vegetation growth patterns from different root depth and allocation strategies as a function of hillslope position. This is also supported by the correspondence of modeled and field measured spatial patterns of root depths and catchmentlevel aboveground vegetation productivity. We test whether the simulated spatial pattern of vegetation corresponds to measured canopy patterns and an optimal state relative to a set of ecosystem processes, defined as maximizing ecosystem productivity and water use efficiency at the catchment scale. Optimal carbon uptake ranges show effective compromises between multiple resources (water, light, and nutrients), modulated by vegetation allocation dynamics along hillslope gradient. Citation: Hwang, T., L. Band, and T. C. Hales (2009), Ecosystem processes at the watershed scale: Extending optimality theory from plot to catchment, Water Resour. Res., 45, W11425,
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...tivity, which includes a temperaturedependent function [dePury andFarquhar, 1997;Chen et al., 1999; Wilson et al., 2000]. [11] Electron transport limited photosynthesis (Aj) is catalyzed by Ribulose-bisphosphate carboxylase-oxygenase (RuBP) enzyme, often called RuBP-limited photosynthesis [Farquhar et al., 1980; Farquhar and von Caemmerer, 1982; de Pury and Farquhar, 1997]: Aj J Ci G* 4:5Ci þ 10:5G* ð3Þ where J is the electron transport rate, calculated from a quadratic equation as a function of effective irradiance (Ie) and the maximum electron transport rate (Jmax). A fixed ratio (2.1; [Wullschleger, 1993]) is usually assumed between Jmax and Vmax even though this ratio can vary with temperature sensitivities of both components. 2.2. Coupled Photosynthesis-Stomatal Conductance Models [12] Many stomatal conductance (gs) models [e.g., Baldocchi et al., 1991; McMurtrie et al., 1992; Sellers et al., 1992; Leuning, 1995; Chen et al., 1999; Oren and Pataki, 2001; Kim et al., 2008] use an empirical equation from Jarvis [1976], which assumes that environmental factors act independently to control stomatal conductance: gs gs:maxf VPDð Þf yð Þf APARð Þf CO2ð Þ ð4Þ where gs.max is the maximum stomatal ...

Comparing physiological responses of two dominant grass species to nitrogen addition in Xilin River Basin of China. Environmental and Experimental Botany 53

by Shiping Chen, Yongfei Bai, Lixia Zhang, Xingguo Han , 2005
"... The two dominant species, Leymus chinensis and Stipa grandis have different distribution area in the Xilin River Basin: relatively wet and fertile for L. chinensis and dryer and leaner for S. grandis. Different photosynthetic physiology traits and resource use efficiency might contribute to the dist ..."
Abstract - Cited by 6 (0 self) - Add to MetaCart
The two dominant species, Leymus chinensis and Stipa grandis have different distribution area in the Xilin River Basin: relatively wet and fertile for L. chinensis and dryer and leaner for S. grandis. Different photosynthetic physiology traits and resource use efficiency might contribute to the distribution pattern of two species in heterogeneous habitats. In this study, the plant nitrogen (N) content, C/N ratio, δ13C values and photosynthetic characteristics of L. chinensis and S. grandis were measured at five different N addition rates. We found that N addition resulted in significant increase in N concentration of plant tissues and decrease in C/N ratio of the two species; L. chinensis had higher N concentration and lower C/N ratio than S. grandis. Increasing N addition rates enhanced the maximum photosynthetic rate (Am) of L. chinensis, whereas Am of S. grandis responded only to low N supply rates. Nitrogen addition led to a decrease in the maximum apparent quantum yield (Φm) but had little effect on the light compensation point (LCP) and the light saturation point (LSP) of the two species. Varying N addition rates did not alter the gas exchange characteristics including net photosynthetic rate (A), transpiration rate (E), stomatal conductance (gs), and intercellular CO2 concentration (Ci). A and gs of L. chinensis were consistently and considerably higher than those of S. grandis with and without N addition. Although there were no significant effects of N supply on the instantaneous water-use efficiency (WUEi), the δ13C values of L. chinensis were significantly higher with increased N addition rates. A closely positive correlation was found between δ13C and WUEi in the two species. Our results suggested that contrasting physiological strategies were employed to
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...ites in the chloroplast is greater or indicate a low intrinsic allocation rate of foliar N to the photosynthetic apparatus at a given foliar N concentration (Seemann et al., 1987; Lloyd et al., 1992; =-=Wullschleger, 1993-=-; Brown et al., 1996). 4.2. Effects of N addition rates on water-use efficiency of L. chinensis and S. grandis δ13C values of plant foliage, an indicator of long-term WUE, provide a useful measure of ...

Photosynthetic and structural characteristics of canopy 485 and shrub trees in a cool-temperate deciduous broadleaved forest: Implication to the ecosystem carbon gain

by Hiroyuki Muraoka , Hiroshi Koizumi - Agric. For. Meteorol , 2005
"... Abstract To reveal the seasonal change of leaf ecophysiological and canopy characteristics and to evaluate the functional role of canopy and shrub tree species in forest CO 2 uptake, we measured forest canopy leaf area index (LAI) using a hemispherical canopy photography technique, leaf CO 2 gas ex ..."
Abstract - Cited by 6 (0 self) - Add to MetaCart
Abstract To reveal the seasonal change of leaf ecophysiological and canopy characteristics and to evaluate the functional role of canopy and shrub tree species in forest CO 2 uptake, we measured forest canopy leaf area index (LAI) using a hemispherical canopy photography technique, leaf CO 2 gas exchange and shoot architecture for canopy (Betula ermanii and Quercus crispula) and shrub (Hydrangea paniculata and Viburnum furcatum) tree species in a deciduous broadleaved forest in a cool-temperate region in central Japan. Canopy LAI and photosynthetic capacity of canopy tree leaves increased rapidly with leaf expansion. LAI reached its maximum in early summer but photosynthetic capacity reached its maximum in late summer. Development of photosynthetic capacity was dependent on the changes of leaf mass per area and leaf chlorophyll content (evaluated by SPAD). The seasonal maximum photosynthetic capacity of the leaves at the forest canopy top (B. ermanii and sun leaves of Q. crispula) was about more than double of the leaves in the shrub layer (H. paniculata, shade leaves of Q. crispula and V. furcatum). Light interception and photosynthetic carbon gain at a shoot level were simulated under three air temperature conditions by a three-dimensional canopy photosynthesis model (Y-plant) involving the combined leaf photosynthesis and stomatal conductance responses and shoot architecture. Results showed that (1) calculations without considering the heterogeneous light distribution in a foliage made by geometrical feature of plants would overestimate the photosynthetic carbon gain by +40% even at the canopy surface, and (2) the steep leaf angle in B. ermanii avoided midday depression of photosynthesis while the rather horizontal leaves in Q. crispula received excess light and heat load which led larger midday depression of photosynthesis. In addition to the large capacity of photosynthetic productivity of the canopy top foliage, our model also suggests the functional role of shrub species in forest ecosystem carbon gain, due to their high photosynthetic utilization efficiency of low light incidence available in the forest understory. #
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...e RuBP regeneration capacity, which is expressed by Jmax, higher allocation of nitrogen to the responsible component would maintain photosynthetic production under low temperature conditions such as in spring and autumn (cf. Berry and Bjorkman, 1980). The opposite would be also true since the photosynthetic rate under higher temperature conditions in summer is limited by RuBP carboxylation capacity (Vcmax) (see also Hikosaka et al., 1999). If plants change Jmax/Vcmax responding to the seasonal change of temperature condition (i.e., temperature acclimation), simple scaling from Vcmax to Jmax (Wullschleger, 1993) assuming their constant ratio would underestimate Jmax in low temperature seasons. We were not able to test these effects since our present data on Jmax and Vcmax at 25 8C (and thus Jmax25/ Vcmax25) are calculated but not obtained by measuring temperature dependency of A–Ci curves. Future measurements of temperature dependency for each species throughout the season are needed for accurate scaling from leaf level ecophysiology to canopy scale behavior over the season. 5.2. Effects of leaf properties and shoot architecture on productivity at the canopy top Our calculation of light interception ...

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