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Base-calling of automated sequencer traces using phred. I. Accuracy Assessment

by Brent Ewing, Ladeana Hillier, Michael C. Wendl, Phil Green - GENOME RES , 1998
"... The availability of massive amounts of DNA sequence information has begun to revolutionize the practice of biology. As a result, current large-scale sequencing output, while impressive, is not adequate to keep pace with growing demand and, in particular, is far short of what will be required to obta ..."
Abstract - Cited by 1653 (4 self) - Add to MetaCart
The availability of massive amounts of DNA sequence information has begun to revolutionize the practice of biology. As a result, current large-scale sequencing output, while impressive, is not adequate to keep pace with growing demand and, in particular, is far short of what will be required

Unsupervised word sense disambiguation rivaling supervised methods

by David Yarowsky - IN PROCEEDINGS OF THE 33RD ANNUAL MEETING OF THE ASSOCIATION FOR COMPUTATIONAL LINGUISTICS , 1995
"... This paper presents an unsupervised learning algorithm for sense disambiguation that, when trained on unannotated English text, rivals the performance of supervised techniques that require time-consuming hand annotations. The algorithm is based on two powerful constraints -- that words tend to have ..."
Abstract - Cited by 638 (4 self) - Add to MetaCart
This paper presents an unsupervised learning algorithm for sense disambiguation that, when trained on unannotated English text, rivals the performance of supervised techniques that require time-consuming hand annotations. The algorithm is based on two powerful constraints -- that words tend to have

A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res

by Michaelw. Pfaffl
"... Use of the real-time polymerase chain reaction (PCR) to amplify cDNA products reverse transcribed from mRNA is on the way to becoming a routine tool in molecular biology to study low abundance gene expression. Real-time PCR is easy to perform, provides the necessary accuracy and produces reliable as ..."
Abstract - Cited by 1088 (4 self) - Add to MetaCart
Use of the real-time polymerase chain reaction (PCR) to amplify cDNA products reverse transcribed from mRNA is on the way to becoming a routine tool in molecular biology to study low abundance gene expression. Real-time PCR is easy to perform, provides the necessary accuracy and produces reliable

GPS-Less Low Cost Outdoor Localization for Very Small Devices.

by Nirupama Bulusu , John Heidemann , Deborah Estrin - IEEE Personal Communications Magazine, , 2000
"... Abstract-Instrumenting the physical world through large networks of wireless sensor nodes, particularly for applications like environmental monitoring of water and soil, requires that these nodes be very small, light, untethered and unobtrusive. The problem of localization, i.e., determining where ..."
Abstract - Cited by 1000 (27 self) - Add to MetaCart
Abstract-Instrumenting the physical world through large networks of wireless sensor nodes, particularly for applications like environmental monitoring of water and soil, requires that these nodes be very small, light, untethered and unobtrusive. The problem of localization, i.e., determining where

Unreliable Failure Detectors for Reliable Distributed Systems

by Tushar Deepak Chandra, Sam Toueg - Journal of the ACM , 1996
"... We introduce the concept of unreliable failure detectors and study how they can be used to solve Consensus in asynchronous systems with crash failures. We characterise unreliable failure detectors in terms of two properties — completeness and accuracy. We show that Consensus can be solved even with ..."
Abstract - Cited by 1094 (19 self) - Add to MetaCart
We introduce the concept of unreliable failure detectors and study how they can be used to solve Consensus in asynchronous systems with crash failures. We characterise unreliable failure detectors in terms of two properties — completeness and accuracy. We show that Consensus can be solved even

A Survey of Program Slicing Techniques

by F. Tip - JOURNAL OF PROGRAMMING LANGUAGES , 1995
"... A program slice consists of the parts of a program that (potentially) affect the values computed at some point of interest, referred to as a slicing criterion. The task of computing program slices is called program slicing. The original definition of a program slice was presented by Weiser in 197 ..."
Abstract - Cited by 790 (10 self) - Add to MetaCart
, whereas the latter relies on some specific test case. Procedures, arbitrary control flow, composite datatypes and pointers, and interprocess communication each require a specific solution. We classify static and dynamic slicing methods for each of these features, and compare their accuracy

Boosting a Weak Learning Algorithm By Majority

by Yoav Freund , 1995
"... We present an algorithm for improving the accuracy of algorithms for learning binary concepts. The improvement is achieved by combining a large number of hypotheses, each of which is generated by training the given learning algorithm on a different set of examples. Our algorithm is based on ideas pr ..."
Abstract - Cited by 516 (16 self) - Add to MetaCart
We present an algorithm for improving the accuracy of algorithms for learning binary concepts. The improvement is achieved by combining a large number of hypotheses, each of which is generated by training the given learning algorithm on a different set of examples. Our algorithm is based on ideas

Fronts propagating with curvature dependent speed: algorithms based on Hamilton–Jacobi formulations

by Stanley Osher, James A. Sethian , 1988
"... We devise new numerical algorithms, called PSC algorithms, for following fronts propagating with curvature-dependent speed. The speed may be an arbitrary function of curvature, and the front also can be passively advected by an underlying flow. These algorithms approximate the equations of motion, w ..."
Abstract - Cited by 1183 (60 self) - Add to MetaCart
, which resemble Hamilton-Jacobi equations with parabolic right-hand sides, by using techniques from hyperbolic conservation laws. Nonoscillatory schemes of various orders of accuracy are used to solve the equations, providing methods that accurately capture the formation of sharp gradients and cusps

Pegasos: Primal Estimated sub-gradient solver for SVM

by Shai Shalev-Shwartz, Yoram Singer, Nathan Srebro, Andrew Cotter
"... We describe and analyze a simple and effective stochastic sub-gradient descent algorithm for solving the optimization problem cast by Support Vector Machines (SVM). We prove that the number of iterations required to obtain a solution of accuracy ɛ is Õ(1/ɛ), where each iteration operates on a singl ..."
Abstract - Cited by 542 (20 self) - Add to MetaCart
We describe and analyze a simple and effective stochastic sub-gradient descent algorithm for solving the optimization problem cast by Support Vector Machines (SVM). We prove that the number of iterations required to obtain a solution of accuracy ɛ is Õ(1/ɛ), where each iteration operates on a

Attention and the detection of signals

by Michael I. Posner, Charles R. R. Snyder, Brian J. Davidson - Journal of Experimental Psychology: General , 1980
"... Detection of a visual signal requires information to reach a system capable of eliciting arbitrary responses required by the experimenter. Detection latencies are reduced when subjects receive a cue that indicates where in the visual field the signal will occur. This shift in efficiency appears to b ..."
Abstract - Cited by 565 (2 self) - Add to MetaCart
Detection of a visual signal requires information to reach a system capable of eliciting arbitrary responses required by the experimenter. Detection latencies are reduced when subjects receive a cue that indicates where in the visual field the signal will occur. This shift in efficiency appears
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