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2D and 3D DNA Lattices Via Staggered Assembly of the Double-Decker Tile
"... abbreviated to 2D-SDD lattice) and a three dimensional DNA lattice (named 3D staggered double-decker lattice, abbreviated to 3D-SDD lattice) self-assembled from the double-decker tile. The double-decker (DD) tile is a cross shaped DNA nanostructure that has previously been shown (Majumder et al., 20 ..."
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abbreviated to 2D-SDD lattice) and a three dimensional DNA lattice (named 3D staggered double-decker lattice, abbreviated to 3D-SDD lattice) self-assembled from the double-decker tile. The double-decker (DD) tile is a cross shaped DNA nanostructure that has previously been shown (Majumder et al
GT2006-90434 THE EFFECT OF STAGGER VARIABILITY IN GAS TURBINE FAN ASSEMBLIES
"... ABSTRACT Fan blades of high bypass ratio gas turbine engines are subject to substantial aerodynamic and centrifugal loads, producing the well-known phenomenon of fan blade untwist. The accurate prediction of the running geometry, as opposed to the cold geometry at rest, is crucial in the assessment ..."
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stagger variability on the dynamic untwist behaviour of fan assemblies. An aeroelastic model was used to show that under certain conditions the stagger pattern changes significantly, both in form and amplitude, relative to the static configuration. At other conditions, a strong correlation between
MagicWand: A Single, Designed Peptide That Assembles to Stable, Ordered
, 2008
"... ABSTRACT: We describe a straightforward single-peptide design that self-assembles into extended and thickened nano-to-mesoscale fibers of remarkable stability and order. The basic chassis of the design is the well-understood dimeric R-helical coiled-coil motif. As such, the peptide has a heptad sequ ..."
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sequence repeat, abcdefg, with isoleucine and leucine residues at the a and d sites to ensure dimerization. In addition, to direct staggered assembly of peptides and to foster fibrillogenesissthat is, as opposed to blunt-ended discrete speciessthe terminal quarters of the peptide are cationic
Genome Assembly Has a Major Impact on Gene Content: A Comparison of Annotation in Two Bos Taurus Assemblies
"... Gene and SNP annotation are among the first and most important steps in analyzing a genome. As the number of sequenced genomes continues to grow, a key question is: how does the quality of the assembled sequence affect the annotations? We compared the gene and SNP annotations for two different Bos t ..."
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Cited by 2 (0 self)
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taurus genome assemblies built from the same data but with significant improvements in the later assembly. The same annotation software was used for annotating both sequences. While some annotation differences are expected even between high-quality assemblies such as these, we found that a staggering 40
3D adaptive central schemes: part I. Algorithms for assembling the dual mesh
- Appl Numer Math
"... Abstract. Central schemes are frequently used for incompressible and compressible flow calculations. The present paper is the first in a forthcoming series where a new approach to a 2nd order accurate Finite Volume scheme operating on cartesian grids is discussed. Here we start with an adaptively re ..."
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Cited by 7 (0 self)
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refined cartesian primal grid in 3D and present a construction technique for the staggered dual grid based on L ∞-Voronoi cells. The local refinement constellation on the primal grid leads to a finite number of uniquely defined local patterns on a primal cell. Assembling adjacent local patterns forms
Reconstitution of cytokeratin filaments in vitro: further evidence for the role of nonhelical peptides in filament assembly
- J. Cell
, 1984
"... ABSTRACT The in vitro renaturation and assembly of cytokeratin molecules to form intermediate filaments (IF) illustrates that these molecules contain all of the structural information necessary for IF information. These molecules contain nine structural domains: the aminoand carboxyterminal extra he ..."
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Cited by 7 (0 self)
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peptides on intact cytokeratin potentiate the assembly of IF by orientating the stagger of laterally associated protofilaments.
The rod domain of NF-L determines neurofilament architecture, whereas the end domains specify filament assembly and network formation
, 1993
"... Abstract. Neurofilaments, assembled from NF-L, NF-M, and NF-H subunits, are the most abundant structural elements in myelinated axons. Although all three subunits contain a central, t~-helical rod domain thought to mediate filament assembly, only NF-L selfassembles into 10-nm filaments in vitro. To ..."
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Cited by 9 (0 self)
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Abstract. Neurofilaments, assembled from NF-L, NF-M, and NF-H subunits, are the most abundant structural elements in myelinated axons. Although all three subunits contain a central, t~-helical rod domain thought to mediate filament assembly, only NF-L selfassembles into 10-nm filaments in vitro
Assistive Workflow Assembly for Life-Sciences Web Service Composition in the BioMoby Semantic Web Framework
"... Researchers in the life sciences are currently limited to small-scale informatics experiments and analyses because of the lack of interoperability among lifesciences web services [31]. One method of surmounting this limitation is by annotating services and their interfaces with semantic information, ..."
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to select from when building a workflow grows staggeringly large, which complicates the task of workflow assembly. As such, attempts have been made to assist with service selection or to automatically assemble workflow fragments for the user. These tasks fall under the general label of automated service
Expression of Chicken Lamin B2 in Escherichia coli: Characterization of its Structure, Assembly, and Molecular Interactions
"... Abstract. Chicken lamin B2, a nuclear member of the intermediate-type filament (IF) protein family, was expressed as a full-length protein in Escherichia coli. After purification, its structure and assembly properties were explored by EM, using both glycerol spraying/low-angle rotary metal shadowing ..."
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Abstract. Chicken lamin B2, a nuclear member of the intermediate-type filament (IF) protein family, was expressed as a full-length protein in Escherichia coli. After purification, its structure and assembly properties were explored by EM, using both glycerol spraying/low-angle rotary metal
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