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Protein-Protein Interaction Classification

by Dilpreet Kaur, Dr. Shailendra Singh
"... Abstract- Proteins form a very important part of a living cell. The biological functions are carried out by the proteins within the cell by interacting with other proteins in other cells. This is called protein-protein interaction. Protein-Protein Interactions are very important in understanding the ..."
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Abstract- Proteins form a very important part of a living cell. The biological functions are carried out by the proteins within the cell by interacting with other proteins in other cells. This is called protein-protein interaction. Protein-Protein Interactions are very important in understanding

PocketQuery: protein–protein interaction inhibitor

by David Ryan Koes, Carlos J. Camacho , 2012
"... starting points from protein–protein interaction structure ..."
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starting points from protein–protein interaction structure

Analyzing protein–protein interactions in cell membranes

by Anja Nohe, Nils O Petersen, Anja Nohe, Nils O. Petersen , 2004
"... Analyzing protein-protein interactions in cell membranes ..."
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Analyzing protein-protein interactions in cell membranes

of structurally characterized protein-protein interactions: the PICCOLO database

by George R Bickerton, Alicia P Higueruelo, Tom L Blundell
"... structurally characterized protein-protein interactions: the PICCOLO database ..."
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structurally characterized protein-protein interactions: the PICCOLO database

Transient protein–protein interactions

by Saliha Ece, Acuner Ozbabacan, Hatice Billur Engin, Attila Gursoy, Ozlem Keskin, Frederic Rousseau , 2010
"... Transient complexes are crucial for diverse biological processes such as biochemical pathways and signaling cascades in the cell. Here, we give an overview of the transient interactions; the importance of transient inter-actions as drug targets; and the structural characteriz-ation of transient prot ..."
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protein–protein complexes based on the geometrical and physicochemical features of the transient complexes ’ interfaces. To better understand and even-tually design transient protein–protein interactions (TPPIs), a molecular perspective of the protein–protein interfaces is necessary. Obtaining high

Extracting Protein-Protein Interaction Sentences

by Applying Rough Set, Filip Ginter, Tapio Pahikkala, Sampo Pyysalo, Jorma Boberg, Jouni Järvinen, Tapio Salakoski - In Proceedings of the Fourth International Conference on Rough Sets and Current Trends in Computing, Lecture Notes in Computer Science 3066 Edited by: Tsumoto H, Slowinski R, Komorowski J, Grzymala-Busse JW. Springer-Verlag , 2004
"... In this paper, we introduce a way to apply rough set data analysis to the problem of extracting protein-protein interaction sentences in biomedical literature. ..."
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In this paper, we introduce a way to apply rough set data analysis to the problem of extracting protein-protein interaction sentences in biomedical literature.

for the detection of protein-protein interactions

by Qiongming Liu, Qing Chen, Jian Wang, Ying Zhang, Ying Zhou, Cong Lin, Wei He, Fuchu He, Danke Xu
"... Background: Analysis of protein-protein interactions (PPIs) is a valuable approach for the characterization of huge networks of protein complexes or proteins of unknown function. Co-immunoprecipitation (coIP) using affinity resins coupled to protein A/G is the most widely used method for PPI detecti ..."
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Background: Analysis of protein-protein interactions (PPIs) is a valuable approach for the characterization of huge networks of protein complexes or proteins of unknown function. Co-immunoprecipitation (coIP) using affinity resins coupled to protein A/G is the most widely used method for PPI

Plant Protein-Protein Interaction Studies

by Anneke Horstman, Richard G H Immink, Anneke Horstman, Isabella Antonia, Nougalli Tonaco, Kim Boutilier, Richard G. H. Immink , 2014
"... Abstract: Since its introduction in plants 10 years ago, the bimolecular fluorescence complementation (BiFC) method, or split-YFP (yellow fluorescent protein), has gained popularity within the plant biology field as a method to study protein-protein interactions. BiFC is based on the restoration of ..."
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Abstract: Since its introduction in plants 10 years ago, the bimolecular fluorescence complementation (BiFC) method, or split-YFP (yellow fluorescent protein), has gained popularity within the plant biology field as a method to study protein-protein interactions. BiFC is based on the restoration

Visualization and Integration of Protein-Protein Interactions

by Peter Uetz, Trey Ideker, Benno Schwikowski , 2002
"... CONTENTS INTRODUCTION ..........................................................................................................................................2 WHY DO WE NEED VISUALIZATION? .......................................................................................................... ..."
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? .............................................................................................................3 PROTEIN INTERACTION MAPS VERSUS METABOLIC PATHWAYS ....................................................................3 PROTEIN NETWORKS, PROTEIN COMPLEXES, AND DYNAMIC PROTEIN INTERACTIONS ..................................4 PROTEIN-PROTEIN INTERACTIONS AND ASSOCIATED INFORMATION

Protein-protein Interaction: Network Alignment ∗

by Lecturer Roded, Sharan Scribers, Ofer Lavi, Lev Ferdinskoif , 2006
"... In the last few years the amount of available data on protein-protein interaction (PPI) networks have increased rapidly, spanning different species such as yeast, bacteria, fly, worm and Human. The rapid growth is shown in Figure 1. Besides the availability of the data, other incentives to analyze s ..."
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In the last few years the amount of available data on protein-protein interaction (PPI) networks have increased rapidly, spanning different species such as yeast, bacteria, fly, worm and Human. The rapid growth is shown in Figure 1. Besides the availability of the data, other incentives to analyze
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