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Error Bounds and Improved Probability Estimation using the Maximum Likelihood Set

by Damianos Karakos, Sanjeev Khudanpur , 2007
"... Abstract — The maximum likelihood set (MLS) is a novel candidate for nonparametric probability estimation from small samples that permits incorporating prior or structural knowledge into the estimator [1]. It is a set of probability distributions which assign to the observed type (or empirical distr ..."
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Abstract — The maximum likelihood set (MLS) is a novel candidate for nonparametric probability estimation from small samples that permits incorporating prior or structural knowledge into the estimator [1]. It is a set of probability distributions which assign to the observed type (or empirical

Language Modeling with the Maximum Likelihood Set: Complexity Issues and the Back-off Formula

by unknown authors
"... Abstract — The Maximum Likelihood Set (MLS) was recently introduced in [1] as an effective, parameter-free technique for estimating a probability mass function (pmf) from sparse data. The MLS contains all pmfs that assign merely a higher likelihood to the observed counts than to any other set of cou ..."
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Abstract — The Maximum Likelihood Set (MLS) was recently introduced in [1] as an effective, parameter-free technique for estimating a probability mass function (pmf) from sparse data. The MLS contains all pmfs that assign merely a higher likelihood to the observed counts than to any other set

LETTER Communicated by Liam Paninski Maximum Likelihood Set for Estimating a Probability Mass Function

by Bruno M. Jedynak, Département De Mathématiques, Sanjeev Khudanpur
"... We propose a new method for estimating the probability mass function (pmf) of a discrete and finite random variable from a small sample. We focus on the observed counts—the number of times each value appears in the sample—and define the maximum likelihood set (MLS) as the set of pmfs that put more m ..."
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We propose a new method for estimating the probability mass function (pmf) of a discrete and finite random variable from a small sample. We focus on the observed counts—the number of times each value appears in the sample—and define the maximum likelihood set (MLS) as the set of pmfs that put more

Object class recognition by unsupervised scale-invariant learning

by R. Fergus, P. Perona, A. Zisserman - In CVPR , 2003
"... We present a method to learn and recognize object class models from unlabeled and unsegmented cluttered scenes in a scale invariant manner. Objects are modeled as flexible constellations of parts. A probabilistic representation is used for all aspects of the object: shape, appearance, occlusion and ..."
Abstract - Cited by 1127 (50 self) - Add to MetaCart
and relative scale. An entropy-based feature detector is used to select regions and their scale within the image. In learning the parameters of the scale-invariant object model are estimated. This is done using expectation-maximization in a maximum-likelihood setting. In recognition, this model is used in a

Paml 4: Phylogenetic analysis by maximum likelihood

by Ziheng Yang - Mol. Biol. Evol , 2007
"... PAML, currently in version 4, is a package of programs for phylogenetic analyses of DNA and protein sequences using maximum likelihood (ML). The programs may be used to compare and test phylogenetic trees, but their main strengths lie in the rich repertoire of evolutionary models implemented, which ..."
Abstract - Cited by 1201 (28 self) - Add to MetaCart
PAML, currently in version 4, is a package of programs for phylogenetic analyses of DNA and protein sequences using maximum likelihood (ML). The programs may be used to compare and test phylogenetic trees, but their main strengths lie in the rich repertoire of evolutionary models implemented, which

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

by Stéphane Guindon, Olivier Gascuel , 2003
"... The increase in the number of large data sets and the complexity of current probabilistic sequence evolution models necessitates fast and reliable phylogeny reconstruction methods. We describe a new approach, based on the maximumlikelihood principle, which clearly satisfies these requirements. The ..."
Abstract - Cited by 2182 (27 self) - Add to MetaCart
of distance-based and parsimony approaches. The reduction of computing time is dramatic in comparison with other maximum-likelihood packages, while the likelihood maximization ability tends to be higher. For example, only 12 min were required on a standard personal computer to analyze a data set consisting

Maximum Likelihood Phylogenetic Estimation from DNA Sequences with Variable Rates over Sites: Approximate Methods

by Ziheng Yang - J. Mol. Evol , 1994
"... Two approximate methods are proposed for maximum likelihood phylogenetic estimation, which allow variable rates of substitution across nucleotide sites. Three data sets with quite different characteristics were analyzed to examine empirically the performance of these methods. The first, called ..."
Abstract - Cited by 557 (29 self) - Add to MetaCart
Two approximate methods are proposed for maximum likelihood phylogenetic estimation, which allow variable rates of substitution across nucleotide sites. Three data sets with quite different characteristics were analyzed to examine empirically the performance of these methods. The first, called

Quartet puzzling: a quartet maximum likelihood method for reconstructing tree topologies.

by Korbinian Strimmer , Arndt Von Haeseler - Mol. Biol. Evol. , 1996
"... A versatile method, quartet puzzling, is introduced to reconstruct the topology (branching pattern) of a phylogenetic tree based on DNA or amino acid sequence data. This method applies maximum-likelihood tree reconstruction to all possible quartets that can be formed from n sequences. The quartet t ..."
Abstract - Cited by 433 (9 self) - Add to MetaCart
A versatile method, quartet puzzling, is introduced to reconstruct the topology (branching pattern) of a phylogenetic tree based on DNA or amino acid sequence data. This method applies maximum-likelihood tree reconstruction to all possible quartets that can be formed from n sequences. The quartet

Probabilistic Principal Component Analysis

by Michael E. Tipping, Chris M. Bishop - JOURNAL OF THE ROYAL STATISTICAL SOCIETY, SERIES B , 1999
"... Principal component analysis (PCA) is a ubiquitous technique for data analysis and processing, but one which is not based upon a probability model. In this paper we demonstrate how the principal axes of a set of observed data vectors may be determined through maximum-likelihood estimation of paramet ..."
Abstract - Cited by 709 (5 self) - Add to MetaCart
Principal component analysis (PCA) is a ubiquitous technique for data analysis and processing, but one which is not based upon a probability model. In this paper we demonstrate how the principal axes of a set of observed data vectors may be determined through maximum-likelihood estimation

A gentle tutorial on the EM algorithm and its application to parameter estimation for gaussian mixture and hidden markov models

by Jeff A. Bilmes , 1997
"... We describe the maximum-likelihood parameter estimation problem and how the Expectation-form of the EM algorithm as it is often given in the literature. We then develop the EM parameter estimation procedure for two applications: 1) finding the parameters of a mixture of Gaussian densities, and 2) fi ..."
Abstract - Cited by 693 (4 self) - Add to MetaCart
rigor. ii 1 Maximum-likelihood Recall the definition of the maximum-likelihood estimation problem. We have a density function ¢¡¤£¦ ¥ §© ¨ that is governed by the set of parameters § (e.g.,   might be a set of Gaussians and § could be the means and covariances). We also have a data set of size
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