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Optimal alignments in linear space

by Eugene W. Myers, Webb Miller - CABIOS , 1988
"... Space, not time, is often the limiting factor when computing optimal sequence alignments, and a number of recent papers in the biology literature have proposed space-saving strategies. However, a 1975 computer science paper by Hirschberg presented a method that is superior to the newer proposals, bo ..."
Abstract - Cited by 292 (4 self) - Add to MetaCart
, both in theory and in practice. The goal of this note is to give Hirschberg’s idea the visibility it deserves by developing a linear-space version of Gotoh’s algorithm, which accommodates affine gap penalties. A portable C-software package implementing this algorithm is available on the BIONET free

Basis of Real Linear Space

by Wojciech Trybulec , 1990
"... this paper. For simplicity, we follow the rules: x is a set, a, b are real numbers, V is a real linear space, W 1 , W 2 , W 3 are subspaces of V , v, v 1 , v 2 are vectors of V , A, B are subsets of the carrier of V , L, L 1 , L 2 are linear combinations of V , l is a linear combination of A, F , G ..."
Abstract - Cited by 285 (21 self) - Add to MetaCart
this paper. For simplicity, we follow the rules: x is a set, a, b are real numbers, V is a real linear space, W 1 , W 2 , W 3 are subspaces of V , v, v 1 , v 2 are vectors of V , A, B are subsets of the carrier of V , L, L 1 , L 2 are linear combinations of V , l is a linear combination of A, F , G

Tropical linear spaces

by David E Speyer , 2004
"... We define tropical analogues of the notions of linear space and Plücker coordinate and study their combinatorics. We introduce tropical analogues of intersection and dualization and define a tropical linear space built by repeated dualization and transverse intersection to be constructible. Our main ..."
Abstract - Cited by 49 (2 self) - Add to MetaCart
We define tropical analogues of the notions of linear space and Plücker coordinate and study their combinatorics. We introduce tropical analogues of intersection and dualization and define a tropical linear space built by repeated dualization and transverse intersection to be constructible. Our

Lambertian Reflectance and Linear Subspaces

by Ronen Basri, David Jacobs , 2000
"... We prove that the set of all reflectance functions (the mapping from surface normals to intensities) produced by Lambertian objects under distant, isotropic lighting lies close to a 9D linear subspace. This implies that, in general, the set of images of a convex Lambertian object obtained under a wi ..."
Abstract - Cited by 526 (20 self) - Add to MetaCart
wide variety of lighting conditions can be approximated accurately by a low-dimensional linear subspace, explaining prior empirical results. We also provide a simple analytic characterization of this linear space. We obtain these results by representing lighting using spherical harmonics and describing

Regular Linear Spaces

by A. Betten , D. Betten
"... We call a finite linear space regular, if all pencils of lines are similar. This means ..."
Abstract - Cited by 2 (2 self) - Add to MetaCart
We call a finite linear space regular, if all pencils of lines are similar. This means

Depth first search and linear graph algorithms

by Robert Tarjan - SIAM JOURNAL ON COMPUTING , 1972
"... The value of depth-first search or "backtracking" as a technique for solving problems is illustrated by two examples. An improved version of an algorithm for finding the strongly connected components of a directed graph and ar algorithm for finding the biconnected components of an undirect ..."
Abstract - Cited by 1406 (19 self) - Add to MetaCart
of an undirect graph are presented. The space and time requirements of both algorithms are bounded by k 1V + k2E d- k for some constants kl, k2, and k a, where Vis the number of vertices and E is the number of edges of the graph being examined.

A NEW POLYNOMIAL-TIME ALGORITHM FOR LINEAR PROGRAMMING

by N. Karmarkar - COMBINATORICA , 1984
"... We present a new polynomial-time algorithm for linear programming. In the worst case, the algorithm requires O(tf'SL) arithmetic operations on O(L) bit numbers, where n is the number of variables and L is the number of bits in the input. The running,time of this algorithm is better than the ell ..."
Abstract - Cited by 860 (3 self) - Add to MetaCart
We present a new polynomial-time algorithm for linear programming. In the worst case, the algorithm requires O(tf'SL) arithmetic operations on O(L) bit numbers, where n is the number of variables and L is the number of bits in the input. The running,time of this algorithm is better than

Maximum Likelihood Linear Transformations for HMM-Based Speech Recognition

by M.J.F. Gales - COMPUTER SPEECH AND LANGUAGE , 1998
"... This paper examines the application of linear transformations for speaker and environmental adaptation in an HMM-based speech recognition system. In particular, transformations that are trained in a maximum likelihood sense on adaptation data are investigated. Other than in the form of a simple bias ..."
Abstract - Cited by 570 (68 self) - Add to MetaCart
bias, strict linear feature-space transformations are inappropriate in this case. Hence, only model-based linear transforms are considered. The paper compares the two possible forms of model-based transforms: (i) unconstrained, where any combination of mean and variance transform may be used, and (ii

Space-time block codes from orthogonal designs

by Vahid Tarokh, Hamid Jafarkhani, A. R. Calderbank - IEEE Trans. Inform. Theory , 1999
"... Abstract — We introduce space–time block coding, a new paradigm for communication over Rayleigh fading channels using multiple transmit antennas. Data is encoded using a space–time block code and the encoded data is split into � streams which are simultaneously transmitted using � transmit antennas. ..."
Abstract - Cited by 1524 (42 self) - Add to MetaCart
of the space–time block code and gives a maximum-likelihood decoding algorithm which is based only on linear processing at the receiver. Space–time block codes are designed to achieve the maximum diversity order for a given number of transmit and receive antennas subject to the constraint of having a simple

Eigenfaces vs. Fisherfaces: Recognition Using Class Specific Linear Projection

by Peter N. Belhumeur, João P. Hespanha, David J. Kriegman , 1997
"... We develop a face recognition algorithm which is insensitive to gross variation in lighting direction and facial expression. Taking a pattern classification approach, we consider each pixel in an image as a coordinate in a high-dimensional space. We take advantage of the observation that the images ..."
Abstract - Cited by 2310 (17 self) - Add to MetaCart
of a particular face, under varying illumination but fixed pose, lie in a 3-D linear subspace of the high dimensional image space -- if the face is a Lambertian surface without shadowing. However, since faces are not truly Lambertian surfaces and do indeed produce self-shadowing, images will deviate
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