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TOWARDS BIG BIOLOGY: HIGH-PERFORMANCE VERIFICATION OF LARGE CONCURRENT SYSTEMS

by Elzbieta Krepska , 2012
"... ..."
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On optimistic methods for concurrency control

by H. T. Kung, John T. Robinson - ACM Transactions on Database Systems , 1981
"... Most current approaches to concurrency control in database systems rely on locking of data objects as a control mechanism. In this paper, two families of nonlocking concurrency controls are presented. The methods used are “optimistic ” in the sense that they rely mainly on transaction backup as a co ..."
Abstract - Cited by 546 (1 self) - Add to MetaCart
Most current approaches to concurrency control in database systems rely on locking of data objects as a control mechanism. In this paper, two families of nonlocking concurrency controls are presented. The methods used are “optimistic ” in the sense that they rely mainly on transaction backup as a

Automatic verification of finite-state concurrent systems using temporal logic specifications

by E. M. Clarke, E. A. Emerson, A. P. Sistla - ACM Transactions on Programming Languages and Systems , 1986
"... We give an efficient procedure for verifying that a finite-state concurrent system meets a specification expressed in a (propositional, branching-time) temporal logic. Our algorithm has complexity linear in both the size of the specification and the size of the global state graph for the concurrent ..."
Abstract - Cited by 1388 (62 self) - Add to MetaCart
We give an efficient procedure for verifying that a finite-state concurrent system meets a specification expressed in a (propositional, branching-time) temporal logic. Our algorithm has complexity linear in both the size of the specification and the size of the global state graph for the concurrent

Large steps in cloth simulation

by David Baraff, Andrew Witkin - SIGGRAPH 98 Conference Proceedings , 1998
"... The bottle-neck in most cloth simulation systems is that time steps must be small to avoid numerical instability. This paper describes a cloth simulation system that can stably take large time steps. The simulation system couples a new technique for enforcing constraints on individual cloth particle ..."
Abstract - Cited by 576 (5 self) - Add to MetaCart
The bottle-neck in most cloth simulation systems is that time steps must be small to avoid numerical instability. This paper describes a cloth simulation system that can stably take large time steps. The simulation system couples a new technique for enforcing constraints on individual cloth

The Google File System

by Sanjay Ghemawat, Howard Gobioff, Shun-tak Leung - ACM SIGOPS OPERATING SYSTEMS REVIEW , 2003
"... We have designed and implemented the Google File System, a scalable distributed file system for large distributed data-intensive applications. It provides fault tolerance while running on inexpensive commodity hardware, and it delivers high aggregate performance to a large number of clients. While s ..."
Abstract - Cited by 1501 (3 self) - Add to MetaCart
We have designed and implemented the Google File System, a scalable distributed file system for large distributed data-intensive applications. It provides fault tolerance while running on inexpensive commodity hardware, and it delivers high aggregate performance to a large number of clients. While

Pregel: A system for large-scale graph processing

by Grzegorz Malewicz, Matthew H. Austern, Aart J. C. Bik, James C. Dehnert, Ilan Horn, Naty Leiser, Grzegorz Czajkowski - IN SIGMOD , 2010
"... Many practical computing problems concern large graphs. Standard examples include the Web graph and various social networks. The scale of these graphs—in some cases billions of vertices, trillions of edges—poses challenges to their efficient processing. In this paper we present a computational model ..."
Abstract - Cited by 496 (0 self) - Add to MetaCart
Many practical computing problems concern large graphs. Standard examples include the Web graph and various social networks. The scale of these graphs—in some cases billions of vertices, trillions of edges—poses challenges to their efficient processing. In this paper we present a computational

Query evaluation techniques for large databases

by Goetz Graefe - ACM COMPUTING SURVEYS , 1993
"... Database management systems will continue to manage large data volumes. Thus, efficient algorithms for accessing and manipulating large sets and sequences will be required to provide acceptable performance. The advent of object-oriented and extensible database systems will not solve this problem. On ..."
Abstract - Cited by 767 (11 self) - Add to MetaCart
Database management systems will continue to manage large data volumes. Thus, efficient algorithms for accessing and manipulating large sets and sequences will be required to provide acceptable performance. The advent of object-oriented and extensible database systems will not solve this problem

A Field Study of the Software Design Process for Large Systems

by Bill Curtis, Herb Krasner, Neil Iscoe - Communications of the ACM , 1988
"... The problems of designing large software systems were studied through interviewing personnel from 17 large projects. A layered behavioral model is used to analyze how three lgf these problems-the thin spread of application domain knowledge, fluctuating and conflicting requirements, and communication ..."
Abstract - Cited by 685 (2 self) - Add to MetaCart
The problems of designing large software systems were studied through interviewing personnel from 17 large projects. A layered behavioral model is used to analyze how three lgf these problems-the thin spread of application domain knowledge, fluctuating and conflicting requirements

The Large-Scale Organization of Metabolic Networks

by H. Jeong, B. Tombor, R. Albert, Z. N. Oltvai, A.-L. Barabási , 2000
"... In a cell or microorganism the processes that generate mass, energy, information transfer, and cell fate specification are seamlessly integrated through a complex network of various cellular constituents and reactions. However, despite the key role these networks play in sustaining various cellular ..."
Abstract - Cited by 609 (7 self) - Add to MetaCart
functions, their large-scale structure is essentially unknown. Here we present the first systematic comparative mathematical analysis of the metabolic networks of 43 organisms representing all three domains of life. We show that, despite significant variances in their individual constituents and pathways

QSplat: A Multiresolution Point Rendering System for Large Meshes

by Szymon Rusinkiewicz, Marc Levoy , 2000
"... Advances in 3D scanning technologies have enabled the practical creation of meshes with hundreds of millions of polygons. Traditional algorithms for display, simplification, and progressive transmission of meshes are impractical for data sets of this size. We describe a system for representing and p ..."
Abstract - Cited by 502 (8 self) - Add to MetaCart
Advances in 3D scanning technologies have enabled the practical creation of meshes with hundreds of millions of polygons. Traditional algorithms for display, simplification, and progressive transmission of meshes are impractical for data sets of this size. We describe a system for representing
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