Results 1 - 10
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2,052
An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database
- J. Am. Soc. Mass Spectrom
, 1994
"... A method to correlate the uninterpreted tandem mass spectra of peptides produced under low energy (lo-50 eV) collision conditions with amino acid sequences in the Genpept database has been developed. In this method the protein database is searched to identify linear amino acid sequences within a mas ..."
Abstract
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Cited by 944 (19 self)
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mass tolerance of * 1 u of the precursor ion molecular weight. A cross-correlation function is then used to provide a measurement of similarity between the mass-to-charge ratios for the fragment ions predicted from amino acid sequences obtained from the database and the fragment ions observed
Interactions of fragment ions of tetradecane with solid surfaces
"... The vapors of tetradecane (C14H30) were ionized by an electron bombardment method. Fragment ions such as C3H7, C6H13 and C12H25 ions were separated by E B filter (Wien filter), and accelerated toward the Si(100) substrates. Thickness measurement showed that thin films were deposited on the Si subs ..."
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The vapors of tetradecane (C14H30) were ionized by an electron bombardment method. Fragment ions such as C3H7, C6H13 and C12H25 ions were separated by E B filter (Wien filter), and accelerated toward the Si(100) substrates. Thickness measurement showed that thin films were deposited on the Si
Predicting molecular formulas of fragment ions with isotope patterns in tandem mass spectra
- IEEE/ACM Trans. Comput. Biol. Bioinformatics
"... Abstract—A number of different approaches have been proposed to predict elemental component formulas (or molecular formulas) of molecular ions in low and medium resolution mass spectra. Most of them rely on isotope patterns, enumerate all possible formulas for an ion, and exclude certain formulas vi ..."
Abstract
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Cited by 10 (0 self)
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violating chemical constraints. However, these methods cannot be well generalized to the component prediction of fragment ions in tandem mass spectra. In this paper, a new method, FFP (Fragment ion Formula Prediction), is presented to predict elemental component formulas of fragment ions. In the FFP method
On the fragment ion angular distributions arising from the tetrahedral molecule CH
"... The mass spectra for both horizontal and vertical polarizations and the angular distributions of fragment ions arising from Coulomb explosion of tetrahedral methyl iodide (CH 3 I) ions, obtained at a laser intensity of 10 16 Wcm -2 are presented. All fragment ion distributions are peaked along the ..."
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The mass spectra for both horizontal and vertical polarizations and the angular distributions of fragment ions arising from Coulomb explosion of tetrahedral methyl iodide (CH 3 I) ions, obtained at a laser intensity of 10 16 Wcm -2 are presented. All fragment ion distributions are peaked along
KINETIC ENERGIES OF FRAGMENT IONS PRODUCED BY ELECTRON IMPACT ON SF6
, 2004
"... An apparatus has been constructed to study the kinetic energies of fragment ions SFn+ (n = 1–5) produced by electron impact on SF6 molecules. The retarding curves of the ions were produced by using a retarding field analyser of einzel lens type [1], and the second derivative method was employed to d ..."
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An apparatus has been constructed to study the kinetic energies of fragment ions SFn+ (n = 1–5) produced by electron impact on SF6 molecules. The retarding curves of the ions were produced by using a retarding field analyser of einzel lens type [1], and the second derivative method was employed
The Effect of MS/MS Fragment Ion Mass Accuracy on Peptide Identification in Shotgun Proteomics
"... Application Note It is widely accepted that high precursor ion mass measurement accuracy significantly improves confidence in MS/MS database search results through the reduction of false positives. In contrast, the impact of high fragment ion mass accuracy has been largely ignored. The Agilent Accur ..."
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Application Note It is widely accepted that high precursor ion mass measurement accuracy significantly improves confidence in MS/MS database search results through the reduction of false positives. In contrast, the impact of high fragment ion mass accuracy has been largely ignored. The Agilent
A DFT study of addition reaction between fragment ion
, 2010
"... (CH2) units and fullerene (C60) molecule ..."
RESEARCH ARTICLE Conformation-Specific Spectroscopy of Peptide Fragment Ions in a Low-Temperature Ion Trap
"... We have applied conformer-selective infrared-ultraviolet (IR-UV) double-resonance photofragment spectroscopy at low temperatures in an ion trap mass spectrometer for the spectroscopic characterization of peptide fragment ions. We investigate b- and a-type ions formed by collisioninduced dissociation ..."
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We have applied conformer-selective infrared-ultraviolet (IR-UV) double-resonance photofragment spectroscopy at low temperatures in an ion trap mass spectrometer for the spectroscopic characterization of peptide fragment ions. We investigate b- and a-type ions formed by collisioninduced
Automated LC-HRMS(/MS) Approach for the Annotation of Fragment Ions Derived from Stable Isotope Labeling-Assisted Untargeted
"... ABSTRACT: Structure elucidation of biological compounds is still a major bottleneck of untargeted LC-HRMS approaches in metabolomics research. The aim of the present study was to combine stable isotope labeling and tandem mass spectrom-etry for the automated interpretation of the elemental compositi ..."
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composition of fragment ions and thereby facilitate the structural characterization of metabolites. The software tool FragExtract was developed and evaluated with LC-HRMS/MS spectra of both native 12C- and uniformly 13C (U-13C)-labeled analytical standards of 10 fungal substances in pure solvent and spiked
Development of Diagnostic Fragment Ion Library for Glycated Peptides of Human Serum Albumin: Targeted Quantification in
"... Human serum albumin is one of the most abundant plasma proteins that readily undergoes glycation, thus glycated albumin has been suggested as an additional marker for monitoring glycemic status. Hitherto, only Amadori-modified peptides of albumin were quantified. In this study, we report the constru ..."
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the construction of fragment ion library for Amadori-modified lysine (AML), N()-(car-boxymethyl)lysine (CML)-, and N()-(carboxyethyl)lysine (CEL)-modified peptides of the corresponding syntheti-cally modified albumin using high resolution accurate mass spectrometry (HR/AM). The glycated peptides were manually
Results 1 - 10
of
2,052