Results 11 - 20 of 100,931

Exploration, normalization, and summaries of high density oligonucleotide array probe level data.

by Rafael A Irizarry , Bridget Hobbs , Francois Collin , Yasmin D Beazer-Barclay , Kristen J Antonellis , Uwe Scherf , Terence P Speed - Biostatistics, , 2003
"... SUMMARY In this paper we report exploratory analyses of high-density oligonucleotide array data from the Affymetrix GeneChip R system with the objective of improving upon currently used measures of gene expression. Our analyses make use of three data sets: a small experimental study consisting of f ..."
Abstract - Cited by 854 (33 self) - Add to MetaCart
SUMMARY In this paper we report exploratory analyses of high-density oligonucleotide array data from the Affymetrix GeneChip R system with the objective of improving upon currently used measures of gene expression. Our analyses make use of three data sets: a small experimental study consisting

A comparison of bayesian methods for haplotype reconstruction from population genotype data.

by Matthew Stephens , Peter Donnelly , Dr Matthew Stephens - Am J Hum Genet , 2003
"... In this report, we compare and contrast three previously published Bayesian methods for inferring haplotypes from genotype data in a population sample. We review the methods, emphasizing the differences between them in terms of both the models ("priors") they use and the computational str ..."
Abstract - Cited by 557 (7 self) - Add to MetaCart
operates through the transmission of chromosomal segments. Experimental methods for haplotype determination exist, but they are currently timeconsuming and expensive. Statistical methods for inferring haplotypes are therefore of considerable interest. In some studies, data may be available on related

A Digital Fountain Approach to Reliable Distribution of Bulk Data

by Michael Luby, et al. , 1998
"... The proliferation of applications that must reliably distribute bulk data to a large number of autonomous clients motivates the design of new multicast and broadcast protocols. We describe an ideal, fully scalable protocol for these applications that we call a digital fountain. A digital fountain a ..."
Abstract - Cited by 492 (19 self) - Add to MetaCart
The proliferation of applications that must reliably distribute bulk data to a large number of autonomous clients motivates the design of new multicast and broadcast protocols. We describe an ideal, fully scalable protocol for these applications that we call a digital fountain. A digital fountain

A theory of memory retrieval

by Roger Ratcliff - PSYCHOL. REV , 1978
"... A theory of memory retrieval is developed and is shown to apply over a range of experimental paradigms. Access to memory traces is viewed in terms of a resonance metaphor. The probe item evokes the search set on the basis of probe-memory item relatedness, just as a ringing tuning fork evokes sympath ..."
Abstract - Cited by 769 (83 self) - Add to MetaCart
comparisons. The mathematical model produces predictions about accuracy, mean reaction time, error latency, and reaction time distributions that are in good accord with experimental data. The theory is applied to four item recognition paradigms (Sternberg, prememorized list, study-test, and continuous

Biclustering algorithms for biological data analysis: a survey.

by Sara C Madeira , Arlindo L Oliveira - IEEE/ACM Transactions of Computational Biology and Bioinformatics, , 2004
"... Abstract A large number of clustering approaches have been proposed for the analysis of gene expression data obtained from microarray experiments. However, the results of the application of standard clustering methods to genes are limited. These limited results are imposed by the existence of a num ..."
Abstract - Cited by 481 (15 self) - Add to MetaCart
Abstract A large number of clustering approaches have been proposed for the analysis of gene expression data obtained from microarray experiments. However, the results of the application of standard clustering methods to genes are limited. These limited results are imposed by the existence of a

Domain names - Implementation and Specification

by P. Mockapetris - RFC-883, USC/Information Sciences Institute , 1983
"... This RFC describes the details of the domain system and protocol, and assumes that the reader is familiar with the concepts discussed in a companion RFC, "Domain Names- Concepts and Facilities " [RFC-1034]. The domain system is a mixture of functions and data types which are an official pr ..."
Abstract - Cited by 725 (9 self) - Add to MetaCart
protocol and functions and data types which are still experimental. Since the domain system is intentionally extensible, new data types and experimental behavior should always be expected in parts of the system beyond the official protocol. The official protocol parts include standard queries, responses

Analysis of Recommendation Algorithms for E-Commerce

by Badrul Sarwar, George Karypis, Joseph Konstan, John Rield , 2000
"... Recommender systems apply statistical and knowledge discovery techniques to the problem of making product recommendations during a live customer interaction and they are achieving widespread success in E-Commerce nowadays. In this paper, we investigate several techniques for analyzing large-scale pu ..."
Abstract - Cited by 523 (22 self) - Add to MetaCart
the web-purchasing transaction of a large E-commerce company whereas the second data set was collected from MovieLens movie recommendation site. For the experimental purpose, we divide the recommendation generation process into three sub processes{ representation of input data, neighborhood formation

Learning with local and global consistency.

by Dengyong Zhou , Olivier Bousquet , Thomas Navin Lal , Jason Weston , Bernhard Schölkopf - In NIPS, , 2003
"... Abstract We consider the general problem of learning from labeled and unlabeled data, which is often called semi-supervised learning or transductive inference. A principled approach to semi-supervised learning is to design a classifying function which is sufficiently smooth with respect to the intr ..."
Abstract - Cited by 673 (21 self) - Add to MetaCart
to the intrinsic structure collectively revealed by known labeled and unlabeled points. We present a simple algorithm to obtain such a smooth solution. Our method yields encouraging experimental results on a number of classification problems and demonstrates effective use of unlabeled data.

Access path selection in a relational database management system

by P. Griffiths Selinger, M. M. Astrahan, D. D. Chamberlin, It. A. Lorie, T. G. Price , 1979
"... ABSTRACT: In a high level query and data manipulation language such as SQL, requests are stated non-procedurally, without reference to access paths. This paper describes how System R chooses access paths for both simple (single relation) and complex queries (such as joins), given a user specificatio ..."
Abstract - Cited by 587 (1 self) - Add to MetaCart
specification of desired data as a boolean expression of predicates. System R is an experimental database management system developed to carry out research on the relational model of data. System R was designed and built by members of the IBM San Jose Research'Laboratory. 1.

RCV1: A new benchmark collection for text categorization research

by David D. Lewis, Yiming Yang, Tony G. Rose, Fan Li - JOURNAL OF MACHINE LEARNING RESEARCH , 2004
"... Reuters Corpus Volume I (RCV1) is an archive of over 800,000 manually categorized newswire stories recently made available by Reuters, Ltd. for research purposes. Use of this data for research on text categorization requires a detailed understanding of the real world constraints under which the data ..."
Abstract - Cited by 663 (11 self) - Add to MetaCart
Reuters Corpus Volume I (RCV1) is an archive of over 800,000 manually categorized newswire stories recently made available by Reuters, Ltd. for research purposes. Use of this data for research on text categorization requires a detailed understanding of the real world constraints under which
Results 11 - 20 of 100,931