Results 1 - 10
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3,701
Using Bayesian networks to analyze expression data
- Journal of Computational Biology
, 2000
"... DNA hybridization arrays simultaneously measure the expression level for thousands of genes. These measurements provide a “snapshot ” of transcription levels within the cell. A major challenge in computational biology is to uncover, from such measurements, gene/protein interactions and key biologica ..."
Abstract
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Cited by 1088 (17 self)
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by showing how Bayesian networks can describe interactions between genes. We then describe a method for recovering gene interactions from microarray data using tools for learning Bayesian networks. Finally, we demonstrate this method on the S. cerevisiae cell-cycle measurements of Spellman et al. (1998). Key
An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database
- J. Am. Soc. Mass Spectrom
, 1994
"... A method to correlate the uninterpreted tandem mass spectra of peptides produced under low energy (lo-50 eV) collision conditions with amino acid sequences in the Genpept database has been developed. In this method the protein database is searched to identify linear amino acid sequences within a mas ..."
Abstract
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Cited by 944 (19 self)
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from peptides obtained from the enzymatically digested total proteins of E. coli and S. cerevisiae cells allowed matchmg of the spectra to amino acid sequences within proteins of these organisms. The approach described in this manuscript provides a convenient method to interpret tandem mass spectra
Ferrofluid modified Saccharomyces cerevisiae cells for biocatalysis. Food Res
- Int
, 2009
"... a b s t r a c t An inexpensive and non-toxic magnetically responsive biocatalyst was prepared by ferrofluid modification of Saccharomyces cerevisiae cells. The prepared biocatalyst enabled efficient decomposition of hydrogen peroxide (HP) and sucrose conversion, due to the presence of active intrac ..."
Abstract
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Cited by 1 (0 self)
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a b s t r a c t An inexpensive and non-toxic magnetically responsive biocatalyst was prepared by ferrofluid modification of Saccharomyces cerevisiae cells. The prepared biocatalyst enabled efficient decomposition of hydrogen peroxide (HP) and sucrose conversion, due to the presence of active
The function of chitin synthases 2 and 3 in the Saccharomyces cerevisiae cell cycle
- J. Cell
, 1991
"... Abstract. The morphology of three Saccharomyces cerevisiae strains, all lacking chitin synthase 1 (Chsl) and two of them deficient in either Chs3 (calRI mutation) or Chs2 was observed by light and electron microscopy. Cells deficient in Chs2 showed clumpy growth and aberrant shape and size. Their se ..."
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Cited by 66 (8 self)
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Abstract. The morphology of three Saccharomyces cerevisiae strains, all lacking chitin synthase 1 (Chsl) and two of them deficient in either Chs3 (calRI mutation) or Chs2 was observed by light and electron microscopy. Cells deficient in Chs2 showed clumpy growth and aberrant shape and size
Mitochondrial Inheritance Is Delayed in Saccharomyces cerevisiae Cells Lacking the
, 1998
"... In wild-type yeast mitochondrial inheritance occurs early in the cell cycle concomitant with bud emergence. Cells lacking the PTC1 gene initially produce buds without a mitochondrial compartment; however, these buds later receive part of the mitochondrial network from the mother cell. Thus, the loss ..."
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In wild-type yeast mitochondrial inheritance occurs early in the cell cycle concomitant with bud emergence. Cells lacking the PTC1 gene initially produce buds without a mitochondrial compartment; however, these buds later receive part of the mitochondrial network from the mother cell. Thus
Saccharomyces cerevisiae cells lacking Grx6
"... Altered intracellular calcium homeostasis and endoplasmic reticulum redox state in ..."
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Altered intracellular calcium homeostasis and endoplasmic reticulum redox state in
PMA1 and PMA2 Genes in Saccharomyces cerevisiae Cells Grown at Supraoptimal Temperatures
, 1995
"... Activation of plasma membrane H(+)-ATPase and expression of PMA1 and PMA2 genes in Saccharomyces cerevisiae cells grown at supraoptimal temperatures. ..."
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Activation of plasma membrane H(+)-ATPase and expression of PMA1 and PMA2 genes in Saccharomyces cerevisiae cells grown at supraoptimal temperatures.
Regulatory networks revealed by transcriptional profiling of damaged Saccharomyces cerevisiae cells: Rpn4 links base excision repair with proteasomes
- Mol. Cell. Biol
, 2000
"... Exposure to carcinogenic alkylating agents, oxidizing agents, and ionizing radiation modulates transcript levels for over one third of Saccharomyces cerevisiae’s 6,200 genes. Computational analysis delineates groups of coregulated genes whose upstream regions bear known and novel regulatory sequence ..."
Abstract
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Cited by 87 (5 self)
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Exposure to carcinogenic alkylating agents, oxidizing agents, and ionizing radiation modulates transcript levels for over one third of Saccharomyces cerevisiae’s 6,200 genes. Computational analysis delineates groups of coregulated genes whose upstream regions bear known and novel regulatory
Multiplexed protein quantitation in Saccharomyces cerevisiae using aminereactive isobaric tagging reagents,”
- Molecular and Cellular Proteomics,
, 2004
"... We describe here a multiplexed protein quantitation strategy that provides relative and absolute measurements of proteins in complex mixtures. At the core of this methodology is a multiplexed set of isobaric reagents that yield amine-derivatized peptides. The derivatized peptides are indistinguisha ..."
Abstract
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Cited by 248 (1 self)
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for relative protein quantitation using MS. Other elegant approaches use cell-culture enrichment with a stable isotope-labeled amino acid, including arginine (5), lysine (6), tyrosine (7), and leucine (8), for in vivo incorporation of a mass difference to support relative quantitation. This circumvents
Results 1 - 10
of
3,701