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Why Linked Data is Not Enough for Scientists

by Sean Bechhofer A, Iain Buchan B, David De Roure D, Paolo Missier A, Ainsworth B, Jiten Bhagat A, Philip Couch B, Don Cruickshank C, Owen A, David Newman C, Shoaib Sufi A, Carole Goble A
"... Scientific data represents a significant portion of the linked open data cloud and scientists stand to benefit from the data fusion capability this will afford. Publishing linked data into the cloud, however, doesn’t ensure the required reusability. Publishing has requirements of provenance, quality ..."
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Scientific data represents a significant portion of the linked open data cloud and scientists stand to benefit from the data fusion capability this will afford. Publishing linked data into the cloud, however, doesn’t ensure the required reusability. Publishing has requirements of provenance

The Computational Brain.

by P S Churchland , T J Sejnowski , Bruce Bridgeman , 1994
"... Keywords: reductionism, neural networks, distributed coding, Karl Pribram, computational neuroscience, receptive field 1.1 The broad goal of this book, expressed at the start, is ``to understand how neurons give rise to a mental life.'' A mental reductionism is assumed in this seductively ..."
Abstract - Cited by 450 (7 self) - Add to MetaCart
in this seductively simple formulation. Indeed, the book represents reductionism at its best, as the authors guide the reader through the many intermediate levels that link neurons with mental life. In so doing they attack a problem that has persisted for some decades in the neurosciences, since the development

Traffic and related self-driven many-particle systems

by Dirk Helbing , 2000
"... Since the subject of traffic dynamics has captured the interest of physicists, many surprising effects have been revealed and explained. Some of the questions now understood are the following: Why are vehicles sometimes stopped by ‘‘phantom traffic jams’ ’ even though drivers all like to drive fast? ..."
Abstract - Cited by 345 (40 self) - Add to MetaCart
Since the subject of traffic dynamics has captured the interest of physicists, many surprising effects have been revealed and explained. Some of the questions now understood are the following: Why are vehicles sometimes stopped by ‘‘phantom traffic jams’ ’ even though drivers all like to drive fast

The Universal Protein Resource (UniProt): an expanding universe of protein information

by Cathy H. Wu, Rolf Apweiler, Amos Bairoch, Darren A. Natale, Winona C. Barker, Brigitte Boeckmann, Serenella Ferro, Elisabeth Gasteiger, Hongzhan Huang, Rodrigo Lopez, Michele Magrane, Maria J. Martin, Raja Mazumder, Nicole Redaschi, Baris Suzek - Nucleic Acids Res , 2006
"... The Universal Protein Resource (UniProt) provides a central resource on protein sequences and functional annotation with three database components, each addressing a key need in protein bioinformatics. The UniProt Knowledgebase (UniProtKB), compris-ing the manually annotated UniProtKB/Swiss-Prot sec ..."
Abstract - Cited by 302 (20 self) - Add to MetaCart
ProtKB/Swiss-Prot section and the automatically annotated UniProtKB/ TrEMBL section, is the preeminent storehouse of pro-tein annotation. The extensive cross-references, functional and feature annotations and literature-based evidence attribution enable scientists to anal-yse proteins and query across databases. The Uni

Why We Don't Know How to Simulate the Internet

by Vern Paxson, Sally Floyd , 1997
"... Simulating how the global Internet data network behaves is an immensely challenging undertaking because of the network's great heterogeneity and rapid change. The heterogeneity ranges from the individual links that carry the network's traffic, to the protocols that interoperate over the li ..."
Abstract - Cited by 232 (4 self) - Add to MetaCart
Simulating how the global Internet data network behaves is an immensely challenging undertaking because of the network's great heterogeneity and rapid change. The heterogeneity ranges from the individual links that carry the network's traffic, to the protocols that interoperate over

Deploying a wireless sensor network on an active volcano

by Konrad Lorincz, Matt Welsh, Omar Marcillo, Jeff Johnson, Mario Ruiz, Jonathan Lees - IEEE Internet Computing , 2006
"... Augmenting heavy and power-hungry data collection equipment with lighter, smaller wireless sensor network nodes leads to faster,larger deployments. Arrays comprising dozens of wireless sensor nodes are now possible,allowing scientific studies that aren’t feasible with traditional instrumentation. De ..."
Abstract - Cited by 253 (4 self) - Add to MetaCart
data acquisition and scientific studies. Collaborations between computer scientists and other domain scientists have produced networks that can record data at a scale and resolution not previously possible. Taking this progress one step further, wireless sensor networks can potentially advance

Autonomous mental development by robots and animals

by Juyang Weng, James McClelland, Alex Pentland, Olaf Sporns, Ida Stockman, Mriganka Sur, Esther Thelen
"... How does one create an intelligent machine? This problem has proven difficult. Over the past several decades, scientists have taken one of three approaches: In the first, which is knowledge-based, an intelligent machine in a laboratory is directly programmed to perform a given task. In a second, lea ..."
Abstract - Cited by 227 (38 self) - Add to MetaCart
How does one create an intelligent machine? This problem has proven difficult. Over the past several decades, scientists have taken one of three approaches: In the first, which is knowledge-based, an intelligent machine in a laboratory is directly programmed to perform a given task. In a second

Innovating Firms and Aggregate Innovation

by Tor Jakob Klette, Samuel Kortum , 2002
"... We develop a parsimonious model of innovating firms rich enough to confront firm-level evidence. It captures the dynamic behavior of individual heterogenous firms, describes the evolution of an industry with simultaneous entry and exit, and delivers a general equilibrium model of technological chang ..."
Abstract - Cited by 220 (2 self) - Add to MetaCart
We develop a parsimonious model of innovating firms rich enough to confront firm-level evidence. It captures the dynamic behavior of individual heterogenous firms, describes the evolution of an industry with simultaneous entry and exit, and delivers a general equilibrium model of technological

Classification in Networked Data: A toolkit and a univariate case study

by Sofus A. Macskassy, Foster Provost , 2006
"... This paper is about classifying entities that are interlinked with entities for which the class is known. After surveying prior work, we present NetKit, a modular toolkit for classification in networked data, and a case-study of its application to networked data used in prior machine learning resear ..."
Abstract - Cited by 200 (10 self) - Add to MetaCart
the power of class-linkage alone for classification in machine learning benchmark data sets. The results demonstrate that very simple network-classification models perform quite well—well enough that they should be used regularly as baseline classifiers for studies of learning with networked data

Generalized linear mixed models: a practical guide for ecology and evolution.

by Benjamin M Bolker , Mollie E Brooks , Connie J Clark , Shane W Geange , John R Poulsen , M Henry , H Stevens , Jada-Simone S White - Trends in Ecology and Evolution, , 2009
"... How should ecologists and evolutionary biologists analyze nonnormal data that involve random effects? Nonnormal data such as counts or proportions often defy classical statistical procedures. Generalized linear mixed models (GLMMs) provide a more flexible approach for analyzing nonnormal data when ..."
Abstract - Cited by 183 (1 self) - Add to MetaCart
and statistical inference such as hypothesis testing remains difficult. We review the use (and misuse) of GLMMs in ecology and evolution, discuss estimation and inference and summarize 'best-practice' data analysis procedures for scientists facing this challenge. Generalized linear mixed models
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