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The Paradyn Parallel Performance Measurement Tools
- IEEE COMPUTER
, 1995
"... Paradyn is a performance measurement tool for parallel and distributed programs. Paradyn uses several novel technologies so that it scales to long running programs (hours or days) and large (thousand node) systems, and automates much of the search for performance bottlenecks. It can provide precise ..."
Abstract
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Cited by 447 (39 self)
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. It also provides an open interface for performance visualization, and a simple programming library to allow these visualizations to interface to Paradyn. Paradyn can gather and present performance data in terms of high-level parallel languages (such as data parallel Fortran) and can measure programs
Ontowiki - a tool for social, semantic collaboration
- In ISWC 2006, volume 4273 of LNCS
, 2006
"... Abstract We present OntoWiki, a tool providing support for agile, dis-tributed knowledge engineering scenarios. OntoWiki facilitates the visual presentation of a knowledge base as an information map, with different views on instance data. It enables intuitive authoring of semantic con-tent, with an ..."
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Cited by 156 (22 self)
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Abstract We present OntoWiki, a tool providing support for agile, dis-tributed knowledge engineering scenarios. OntoWiki facilitates the visual presentation of a knowledge base as an information map, with different views on instance data. It enables intuitive authoring of semantic con
Design and use paradigms for gazebo, an open-source multi-robot simulator
- In : IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS
, 2004
"... Abstract — Simulators have played a critical role in robotics research as tools for quick and efficient testing of new concepts, strategies, and algorithms. To date, most simulators have been restricted to 2D worlds, and few have matured to the point where they are both highly capable and easily ada ..."
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Cited by 152 (4 self)
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to become more than just a stepping stone between the drawing board and real hardware: data visualization, simulation of remote environments, and even reverse engineering of blackbox systems are all possible applications. Gazebo is developed in cooperation with the Player and Stage projects [1], [2], [3
SOFTWARE Open Access cnvCurator: an interactive visualization and editing tool for somatic copy number variations
"... Background: One of the most important somatic aberrations, copy number variations (CNVs) in tumor genomes is believed to have a high probability of harboring oncotargets. Detection of somatic CNVs is an essential part of cancer genome sequencing analysis, but the accuracy is usually limited due to v ..."
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to various factors. A post-processing procedure including manual review and refinement of CNV segments is often needed in practice to achieve better accuracy. Results: cnvCurator is a user-friendly tool with functions specifically designed to facilitate the process of interactively visualizing and editing
An insight-based methodology for evaluating bioinformatics visualizations
- IEEE Transactions on Visualization and Computer Graphics (Proceedings of the IEEE Symposium on Information Visualization
"... Abstract—High-throughput experiments, such as gene expression microarrays in the life sciences, result in very large data sets. In response, a wide variety of visualization tools have been created to facilitate data analysis. A primary purpose of these tools is to provide biologically relevant insig ..."
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Cited by 94 (6 self)
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Abstract—High-throughput experiments, such as gene expression microarrays in the life sciences, result in very large data sets. In response, a wide variety of visualization tools have been created to facilitate data analysis. A primary purpose of these tools is to provide biologically relevant
LODeX: A tool for Visual Querying Linked Open Data
"... Abstract. Formulating a query on a Linked Open Data (LOD) source is not an easy task; a technical knowledge of the query language, and, the awareness of the structure of the dataset are essential to create a query. We present a revised version of LODeX that provides the user an easy way for building ..."
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Cited by 1 (1 self)
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Abstract. Formulating a query on a Linked Open Data (LOD) source is not an easy task; a technical knowledge of the query language, and, the awareness of the structure of the dataset are essential to create a query. We present a revised version of LODeX that provides the user an easy way
A visual summary for linked open data sources
- International Semantic Web Conference (Posters & Demos
, 2014
"... Abstract. In this paper we propose LODeX, a tool that produces a represen-tative summary of a Linked open Data (LOD) source starting from scratch, thus supporting users in exploring and understanding the contents of a dataset. The tool takes in input the URL of a SPARQL endpoint and launches a set o ..."
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Cited by 8 (4 self)
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Abstract. In this paper we propose LODeX, a tool that produces a represen-tative summary of a Linked open Data (LOD) source starting from scratch, thus supporting users in exploring and understanding the contents of a dataset. The tool takes in input the URL of a SPARQL endpoint and launches a set
The RCSB Protein Data Bank: redesigned web site and web services
- Nucleic Acids Res
, 2010
"... ABSTRACT The RCSB Protein Data Bank (RCSB PDB) web site (http://www.pdb.org) has been redesigned to increase usability and to cater to a larger and more diverse user base. This article describes key enhancements and new features that fall into the following categories: (i) query and analysis tools ..."
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Cited by 94 (5 self)
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ABSTRACT The RCSB Protein Data Bank (RCSB PDB) web site (http://www.pdb.org) has been redesigned to increase usability and to cater to a larger and more diverse user base. This article describes key enhancements and new features that fall into the following categories: (i) query and analysis tools
Genomics Data Curation Roles, Skills, and Perception of Data Quality
"... Abstract Compared to a decade ago, genomics scientists, driven by technical changes and availability of massive genomic data, are performing a wider plurality of curation roles 2 including those of end-users, curators, or dual-role users. Scientists with different curation roles (including that of ..."
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the development of effective data curation mandates and policies, data quality assurance planning and training, and the design of curation role specific tool dashboards and visualization interfaces for genomics data. 3
BIOINFORMATICS VISUALIZATION TOOLS
, 2002
"... Bioinformatics is the use of mathematical and informational techniques to solve biological problems by using computer programs. The people working in bioinformatics deal with the management of all kinds of biological information using computational tools and software. In recent years, with the adven ..."
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the genetic sequences to amino acid sequences; and 4) It offers some convenient functions such as saving documents, opening files, online help topics, and scroll view. This visual computational tool might assist scientific users to analyse the collected data in an efficient manner.
Results 1 - 10
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