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VISUAL INTEGRATION OF RESULTS FROM A LARGE DNA BIOBANK (BIOVU) USING SYNTHESIS-VIEW *

by Sarah Pendergrass, Scott M. Dudek, Dan M. Roden, Dana C. Crawford, Marylyn D. Ritchie
"... In this paper, we describe using Synthesis-View, a new method of presenting complex genetic data, to revisit results of a study from the BioVU Vanderbilt DNA databank. BioVU is a biorepository of DNA samples coupled with de-identified electronic medical records (EMR). In the Ritchie et al. study 1 ~ ..."
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In this paper, we describe using Synthesis-View, a new method of presenting complex genetic data, to revisit results of a study from the BioVU Vanderbilt DNA databank. BioVU is a biorepository of DNA samples coupled with de-identified electronic medical records (EMR). In the Ritchie et al. study 1

Governing biological material at the intersection of care and research: the use of dried blood spots for biobanking

by M W Conor , Douglas , Carla G Van El , Alex Faulkner , Martina C Cornel , 2012
"... Abstract A series of governance issues currently surrounds the multiple uses and multiple users of dried blood spots (DBS) for research purposes. Internationally there is a discussion on storing DBS resulting from newborn screening for public health and using them as the basis for large biobanklike ..."
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Abstract A series of governance issues currently surrounds the multiple uses and multiple users of dried blood spots (DBS) for research purposes. Internationally there is a discussion on storing DBS resulting from newborn screening for public health and using them as the basis for large

Visualization of Hash-functions

by Diplomarbeit Timo, Kilian Darmstadt, Fachbereich Informatik, Theoretische Informatik Kryptographie, Vorgelegte Diplomarbeit, Timo Kilian Darmstadt
"... den angegebenen Quellen und Hilfsmitteln angefertigt zu haben. Alle Stellen, die aus Quellen entnommen wurden, sind als solche kenntlich gemacht. Diese Arbeit hat in gleicher oder ähnlicher Form noch keiner Prüfungsbehörde vorgelegen. Darmstadt, den 26.06.2012 (T. Kilian) Contents ..."
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den angegebenen Quellen und Hilfsmitteln angefertigt zu haben. Alle Stellen, die aus Quellen entnommen wurden, sind als solche kenntlich gemacht. Diese Arbeit hat in gleicher oder ähnlicher Form noch keiner Prüfungsbehörde vorgelegen. Darmstadt, den 26.06.2012 (T. Kilian) Contents

Thesis Advisor Accepted by.......Gakenhimer..

by Gregory A. Rossel, Fiichael J. Shiffer, Ralph Gakenheimer, Gregory A. Rossel
"... ussRaNIte ..."
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Abstract not found

The architectonics of programmable RNA and DNA nanostructures

by Luc Jaeger , Arkadiusz Chworos - Curr. Opin. Struct. Biol , 2006
"... The past several years have witnessed the emergence of a new world of nucleic-acid-based architectures with highly predictable and programmable self-assembly properties. For almost two decades, DNA has been the primary material for nucleic acid nanoconstruction. More recently, the dramatic increase ..."
Abstract - Cited by 22 (6 self) - Add to MetaCart
interactions. Programmable assembly (see glossary) results from the application of folding and assembly principles gleaned from biological structures to design molecules that will, in a predictable manner, fold into specific shapes and subsequently assemble with one another into supramolecular architectures

Integrating Gene Expression Data from Microarrays using the Self-Organising Map and the Gene Ontology

by Ken Mcgarry, Mohammad Sarfraz, John Macintyre
"... Abstract. The self-organizing map (SOM) is useful within bioinformatics research because of its clustering and visualization capabilities. The SOM is a vector quantization method that reduces the dimensionality of original measurement and visualizes individual tumor sample in a SOM component plane. ..."
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. The data is taken from cDNA microarray experiments on Diffuse Large B-Cell Lymphoma (DLBCL) data set of Alizadeh. The objective is to get the SOM to discover biologically meaningful clusters of genes that are active in this particular form of cancer. Despite their powers of visualization, SOMs cannot

Interactive Visualization and Model-based Analysis of Genomics Data

by unknown authors
"... Biotechnologies, such as DNA sequencing and microarray technology, have transformed research in molecular biology from being “gene-centric ” to “genome-centric”, opening new avenues in the areas of drug discovery, clinical diagnostics and agriculture. There is a pressing need for development of new ..."
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computational and visualization techniques to gain biological knowledge from massive amounts of heterogeneous and complex genomics data. Computational methods transform biological questions into mathematical problems to produce large quantities of numerical results that require biological interpretation. Visual

Perspective An Online Bioinformatics Curriculum

by David B. Searls
"... Abstract: Online learning initia-tives over the past decade have become increasingly comprehen-sive in their selection of courses and sophisticated in their presen-tation, culminating in the recent announcement of a number of consortium and startup activities that promise to make a university educat ..."
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Abstract: Online learning initia-tives over the past decade have become increasingly comprehen-sive in their selection of courses and sophisticated in their presen-tation, culminating in the recent announcement of a number of consortium and startup activities that promise to make a university

Copyright and use of this thesis

by James C. Makinson, James C. Makinson , 2013
"... This thesis must be used in accordance with the provisions of the Copyright Act 1968. Reproduction of material protected by copyright may be an infringement of copyright and copyright owners may be entitled to take legal action against persons who infringe their copyright. Section 51 (2) of the Copy ..."
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This thesis must be used in accordance with the provisions of the Copyright Act 1968. Reproduction of material protected by copyright may be an infringement of copyright and copyright owners may be entitled to take legal action against persons who infringe their copyright. Section 51 (2

Active Mask Framework for Segmentation of Fluorescence Microscope Images

by Gowri Srinivasa, Advisor Prof, Prof Matthew, C. Fickus, Prof Adam, D. Linstedt, Prof Robert, F. Murphy
"... m]]l]]s¶D]]¿÷mB]iv]b]oD]m¶¨]iv]§]iv]r]j]t¿rv]]irj]]t]]m] / | ap]]r¿]ÎNy]s¶D]]mb¶r]ix} Û]Ix]]rd]mb]} p—N]t]o%ism] in]ty]m] / || Û]Is]¡uÎc]rN]]riv]nd]p]*N]m]st¶ I always bow to Śri ̄ Śāradāmbā, the limitless ocean of the nectar of compassion, who bears a rosary, a vessel of nectar, the symbol of ..."
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of knowledge and a book in Her lotus hands. Dedicated to the Lotus Feet of the revered Sadguru. This thesis presents a new active mask (AM) framework and an algorithm for segmenta-tion of digital images, particularly those of punctate patterns from fluorescence microscopy. Fluorescence microscopy has greatly
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