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REVIEW Open Access Special issue on bio-ontologies and phenotypes
"... The bio-ontologies and phenotypes special issue includes eight papers selected from the 11 papers presented at the Bio-Ontologies SIG (Special Interest Group) and the Phenotype Day at ISMB (Intelligent Systems for Molecular Biology) conference in Boston in 2014. The selected papers span a wide range ..."
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The bio-ontologies and phenotypes special issue includes eight papers selected from the 11 papers presented at the Bio-Ontologies SIG (Special Interest Group) and the Phenotype Day at ISMB (Intelligent Systems for Molecular Biology) conference in Boston in 2014. The selected papers span a wide
Bio-ontologies: current trends and future directions
- Briefings in Bioinformatics
, 2006
"... In recent years, as a knowledge-based discipline, bioinformatics has been made more computationally amenable. After its beginnings as a technology advocated by computer scientists to overcome problems of heterogeneity, ontology has been taken up by biologists themselves as a means to consistently an ..."
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Cited by 119 (7 self)
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annotate features from genotype to phenotype. In medical informatics, artifacts called ontologies have been used for a longer period of time to produce controlled lexicons for coding schemes. In this article, we review the current position in ontologies and how they have become institutionalized within
Taking a view on bio-ontologies
"... We present a technique for separating knowledge representation from application specific views that are currently often conflated within bio-ontologies. Many ontologies contain information for two tasks; one to represent the knowledge of some field of interest and another to support an application t ..."
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Cited by 1 (1 self)
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We present a technique for separating knowledge representation from application specific views that are currently often conflated within bio-ontologies. Many ontologies contain information for two tasks; one to represent the knowledge of some field of interest and another to support an application
Data and text mining Bio-Ontology and text: bridging the modeling gap
"... Motivation: Natural language processing (NLP) techniques are increasingly being used in biology to automate the capture of new biological discoveries in text, which are being reported at a rapid rate. Yet, information represented in NLP data structures is classically very different from information ..."
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organized with ontologies as found in model organisms or genetic databases. To facilitate the computational reuse and integration of information buried in unstructured text with that of genetic databases, we propose and evaluate a translational schema that represents a comprehensive set of phenotypic
The generic genome browser: a building block for a model organism system database
- 40Genome Res
, 2002
"... Article cited in: ..."
BIOINFORMATICS ORIGINAL PAPER Data and text mining Bio-Ontology and text: bridging the modeling gap
"... doi:10.1093/bioinformatics/btl405 ..."
BIOINFORMATICS Bioinformatics Advance Access published July 26, 2006 Bio-Ontology and Text: Bridging the Modeling Gap
"... ABSTRACT 1 ..."
Homo sacer: sovereign power and bare life
, 1998
"... Homo Sacer. Sovereign Power and Bare Life was originally published as Homo sacer. Il potere sovrano e la nuda vita, © 1995 Giulio Einaudi editore s.p.a. ..."
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Cited by 285 (0 self)
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Homo Sacer. Sovereign Power and Bare Life was originally published as Homo sacer. Il potere sovrano e la nuda vita, © 1995 Giulio Einaudi editore s.p.a.
Published online in Wiley InterScience (www.interscience.wiley.com). DOI: 10.1002/cfg.433 Conference Editorial The Seventh Annual Bio-Ontologies Meeting
, 2004
"... The Annual Bio-Ontologies Meeting [1] has now reached its seventh consecutive year, running as a special interest group (SIG) of the much larger ISMB conference. This year’s meeting in Glasgow had approximately 100 attendees. Since the advent of the Gene Ontology, which coincided with the first Bio- ..."
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The Annual Bio-Ontologies Meeting [1] has now reached its seventh consecutive year, running as a special interest group (SIG) of the much larger ISMB conference. This year’s meeting in Glasgow had approximately 100 attendees. Since the advent of the Gene Ontology, which coincided with the first Bio-Ontologies
concepts
"... The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology ..."
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The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology
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