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3,326
Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev
, 1995
"... cultivation.of individual microbial cells without Phylogenetic identification and in situ detection ..."
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Cited by 1070 (29 self)
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cultivation.of individual microbial cells without Phylogenetic identification and in situ detection
Predicting Protein-Protein Interactions From Primary Structure
, 2001
"... Motivation: An ambitious goal of proteomics is to elucidate the structure, interactions and functions of all proteins within cells and organisms. The expectation is that this will provide a fuller appreciation of cellular processes and networks at the protein level, ultimately leading to a better un ..."
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Cited by 189 (4 self)
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understanding of disease mechanisms and suggesting new means for intervention. This paper addresses the question: can protein--protein interactions be predicted directly from primary structure and associated data? Using a diverse database of known protein interactions, a Support Vector Machine (SVM) learning
Recent progress and future directions in protein-protein docking
"... This article gives an overview of recent progress in protein-protein docking and it identifies several directions for future research. Recent results from the CAPRI blind docking experiments show that docking algorithms are steadily improving in both reliability and accuracy. Current docking algorit ..."
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Cited by 36 (5 self)
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This article gives an overview of recent progress in protein-protein docking and it identifies several directions for future research. Recent results from the CAPRI blind docking experiments show that docking algorithms are steadily improving in both reliability and accuracy. Current docking
Protein–Protein Docking: Overview and Performance Analysis
"... Protein–protein docking is the computational prediction of protein complex structure given the individually solved component protein structures. It is an important means for under-standing the physicochemical forces that underlie macromolecular interactions and a valuable tool for modeling protein c ..."
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Cited by 1 (0 self)
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Protein–protein docking is the computational prediction of protein complex structure given the individually solved component protein structures. It is an important means for under-standing the physicochemical forces that underlie macromolecular interactions and a valuable tool for modeling protein
Enhancing Protein–Protein Docking by new approaches to Protein Flexibility and Scoring of Docking Hypotheses
, 2004
"... ..."
Transient protein–protein interactions
, 2010
"... Transient complexes are crucial for diverse biological processes such as biochemical pathways and signaling cascades in the cell. Here, we give an overview of the transient interactions; the importance of transient inter-actions as drug targets; and the structural characteriz-ation of transient prot ..."
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protein–protein complexes based on the geometrical and physicochemical features of the transient complexes ’ interfaces. To better understand and even-tually design transient protein–protein interactions (TPPIs), a molecular perspective of the protein–protein interfaces is necessary. Obtaining high
Structural bioinformatics DOCKGROUND Protein-Protein Docking Decoy Set
"... Summary: A protein-protein docking decoy set is built for the DOCKGROUND unbound benchmark set. The GRAMM-X docking scan was used to generate 100 non-native and at least one near-native match per complex for 61 complexes. The set is a publicly available resource for the development of scoring functi ..."
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Summary: A protein-protein docking decoy set is built for the DOCKGROUND unbound benchmark set. The GRAMM-X docking scan was used to generate 100 non-native and at least one near-native match per complex for 61 complexes. The set is a publicly available resource for the development of scoring
DockPro: A VR-Based Tool for Protein-Protein Docking Problem Serdar Cakici∗
"... Proteins are large molecules that are vital for all living organisms and they are essential components of many industrial products. The process of binding a protein to another is called protein-protein docking. Many automated algorithms have been proposed to find docking configurations that might yi ..."
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. Haptic devices have been used for molecular dock-ing problems; but they are inappropriate for protein-protein docking due to their workspace limitations. Instead of haptic rendering of forces, we provide a novel visual feedback for simulating physic-ochemical forces of proteins. We propose an interactive
Prediction of physical protein-protein interactions
- Physical Biology
, 2005
"... Many essential cellular processes such as signal transduction, transport, cellular motion and most regulatory mechanisms are mediated by protein–protein interactions. In recent years, new experimental techniques have been developed to discover the protein–protein interaction networks of several orga ..."
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Cited by 21 (1 self)
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Many essential cellular processes such as signal transduction, transport, cellular motion and most regulatory mechanisms are mediated by protein–protein interactions. In recent years, new experimental techniques have been developed to discover the protein–protein interaction networks of several
Results 1 - 10
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