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63,904
A Bayesian method for the induction of probabilistic networks from data
 MACHINE LEARNING
, 1992
"... This paper presents a Bayesian method for constructing probabilistic networks from databases. In particular, we focus on constructing Bayesian belief networks. Potential applications include computerassisted hypothesis testing, automated scientific discovery, and automated construction of probabili ..."
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Cited by 1381 (32 self)
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of probabilistic expert systems. We extend the basic method to handle missing data and hidden (latent) variables. We show how to perform probabilistic inference by averaging over the inferences of multiple belief networks. Results are presented of a preliminary evaluation of an algorithm for constructing a belief
Bayesian Network Classifiers
, 1997
"... Recent work in supervised learning has shown that a surprisingly simple Bayesian classifier with strong assumptions of independence among features, called naive Bayes, is competitive with stateoftheart classifiers such as C4.5. This fact raises the question of whether a classifier with less restr ..."
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Cited by 788 (23 self)
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restrictive assumptions can perform even better. In this paper we evaluate approaches for inducing classifiers from data, based on the theory of learning Bayesian networks. These networks are factored representations of probability distributions that generalize the naive Bayesian classifier and explicitly
Missing data: Our view of the state of the art
 Psychological Methods
, 2002
"... Statistical procedures for missing data have vastly improved, yet misconception and unsound practice still abound. The authors frame the missingdata problem, review methods, offer advice, and raise issues that remain unresolved. They clear up common misunderstandings regarding the missing at random ..."
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Cited by 689 (1 self)
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Statistical procedures for missing data have vastly improved, yet misconception and unsound practice still abound. The authors frame the missingdata problem, review methods, offer advice, and raise issues that remain unresolved. They clear up common misunderstandings regarding the missing
A Bayesian Framework for the Analysis of Microarray Expression Data: Regularized tTest and Statistical Inferences of Gene Changes
 Bioinformatics
, 2001
"... Motivation: DNA microarrays are now capable of providing genomewide patterns of gene expression across many different conditions. The first level of analysis of these patterns requires determining whether observed differences in expression are significant or not. Current methods are unsatisfactory ..."
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Cited by 485 (6 self)
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due to the lack of a systematic framework that can accommodate noise, variability, and low replication often typical of microarray data. Results: We develop a Bayesian probabilistic framework for microarray data analysis. At the simplest level, we model logexpression values by independent normal
Application of Phylogenetic Networks in Evolutionary Studies
 SUBMITTED TO MBE 2005
, 2005
"... The evolutionary history of a set of taxa is usually represented by a phylogenetic tree, and this model has greatly facilitated the discussion and testing of hypotheses. However, it is well known that more complex evolutionary scenarios are poorly described by such models. Further, even when evoluti ..."
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Cited by 867 (15 self)
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evolution proceeds in a treelike manner, analysis of the data may not be best served by using methods that enforce a tree structure, but rather by a richer visualization of the data to evaluate its properties, at least as an essential first step. Thus, phylogenetic networks should be employed when
Network information flow
 IEEE TRANS. INFORM. THEORY
, 2000
"... We introduce a new class of problems called network information flow which is inspired by computer network applications. Consider a pointtopoint communication network on which a number of information sources are to be mulitcast to certain sets of destinations. We assume that the information source ..."
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Cited by 1961 (24 self)
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We introduce a new class of problems called network information flow which is inspired by computer network applications. Consider a pointtopoint communication network on which a number of information sources are to be mulitcast to certain sets of destinations. We assume that the information
Limma: linear models for microarray data
 Bioinformatics and Computational Biology Solutions using R and Bioconductor
, 2005
"... This free opensource software implements academic research by the authors and coworkers. If you use it, please support the project by citing the appropriate journal articles listed in Section 2.1.Contents ..."
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Cited by 759 (13 self)
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This free opensource software implements academic research by the authors and coworkers. If you use it, please support the project by citing the appropriate journal articles listed in Section 2.1.Contents
Powerlaw distributions in empirical data
 ISSN 00361445. doi: 10.1137/ 070710111. URL http://dx.doi.org/10.1137/070710111
, 2009
"... Powerlaw distributions occur in many situations of scientific interest and have significant consequences for our understanding of natural and manmade phenomena. Unfortunately, the empirical detection and characterization of power laws is made difficult by the large fluctuations that occur in the t ..."
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Cited by 589 (7 self)
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estimates for powerlaw data, based on maximum likelihood methods and the KolmogorovSmirnov statistic. We also show how to tell whether the data follow a powerlaw distribution at all, defining quantitative measures that indicate when the power law is a reasonable fit to the data and when it is not. We
Factor Graphs and the SumProduct Algorithm
 IEEE TRANSACTIONS ON INFORMATION THEORY
, 1998
"... A factor graph is a bipartite graph that expresses how a "global" function of many variables factors into a product of "local" functions. Factor graphs subsume many other graphical models including Bayesian networks, Markov random fields, and Tanner graphs. Following one simple c ..."
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Cited by 1787 (72 self)
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A factor graph is a bipartite graph that expresses how a "global" function of many variables factors into a product of "local" functions. Factor graphs subsume many other graphical models including Bayesian networks, Markov random fields, and Tanner graphs. Following one simple
Results 1  10
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63,904