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RNA-Seq

by Adam Roberts, Harold Pimentel, Cole Trapnell, Lior Pachter , 2011
"... of novel transcripts in annotated genomes using ..."
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of novel transcripts in annotated genomes using

RECONSTRUCTION FROM RNA-SEQ DATA

by Serghei Mangul
"... by ..."
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Abstract not found

Visual reconstruction

by Andrew Blake, Andrew Zisserman , 1987
"... ..."
Abstract - Cited by 891 (3 self) - Add to MetaCart
Abstract not found

RNA-Seq data

by unknown authors
"... A survey of software for g ..."
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A survey of software for g

Alternative isoform regulation in human tissue transcriptomes

by Eric T. Wang, Rickard S, Shujun Luo, Irina Khrebtukova, Lu Zhang, Christine Mayr, Stephen F. Kingsmore, Gary P. Schroth, Christopher B. Burge - Nature , 2008
"... Through alternative processing of pre-mRNAs, individual mammalian genes often produce multiple mRNA and protein isoforms that may have related, distinct or even opposing functions. Here we report an in-depth analysis of 15 diverse human tissue and cell line transcriptomes based on deep sequencing of ..."
Abstract - Cited by 525 (4 self) - Add to MetaCart
Through alternative processing of pre-mRNAs, individual mammalian genes often produce multiple mRNA and protein isoforms that may have related, distinct or even opposing functions. Here we report an in-depth analysis of 15 diverse human tissue and cell line transcriptomes based on deep sequencing

Community detection in graphs

by Santo Fortunato , 2009
"... The modern science of networks has brought significant advances to our understanding of complex systems. One of the most relevant features of graphs representing real systems is community structure, or clustering, i. e. the organization of vertices in clusters, with many edges joining vertices of th ..."
Abstract - Cited by 801 (1 self) - Add to MetaCart
The modern science of networks has brought significant advances to our understanding of complex systems. One of the most relevant features of graphs representing real systems is community structure, or clustering, i. e. the organization of vertices in clusters, with many edges joining vertices

Factor Graphs and the Sum-Product Algorithm

by Frank R. Kschischang, Brendan J. Frey, Hans-Andrea Loeliger - IEEE TRANSACTIONS ON INFORMATION THEORY , 1998
"... A factor graph is a bipartite graph that expresses how a "global" function of many variables factors into a product of "local" functions. Factor graphs subsume many other graphical models including Bayesian networks, Markov random fields, and Tanner graphs. Following one simple c ..."
Abstract - Cited by 1787 (72 self) - Add to MetaCart
A factor graph is a bipartite graph that expresses how a "global" function of many variables factors into a product of "local" functions. Factor graphs subsume many other graphical models including Bayesian networks, Markov random fields, and Tanner graphs. Following one simple

The program dependence graph and its use in optimization

by Jeanne Ferrante, Karl J. Ottenstein, Joe D. Warren - ACM Transactions on Programming Languages and Systems , 1987
"... In this paper we present an intermediate program representation, called the program dependence graph (PDG), that makes explicit both the data and control dependence5 for each operation in a program. Data dependences have been used to represent only the relevant data flow relationships of a program. ..."
Abstract - Cited by 989 (3 self) - Add to MetaCart
In this paper we present an intermediate program representation, called the program dependence graph (PDG), that makes explicit both the data and control dependence5 for each operation in a program. Data dependences have been used to represent only the relevant data flow relationships of a program

with RNA-seq

by Shweta S Chavan, Michael A Bauer, Erich A Peterson, Christoph J Heuck, Donald J Johann
"... the integration, annotation and association of historical microarray experiments ..."
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the integration, annotation and association of historical microarray experiments

with RNA-seq

by Ali Mortazavi, Erich M. Schwarz, Brian Williams, Et Al, Ali Mortazavi, Erich M. Schwarz, Brian Williams, Lorian Schaeffer, Igor Antoshechkin, Barbara J. Wold, Paul W. Sternberg
"... This article cites 52 articles, 29 of which can be accessed free at: service Email alerting click heretop right corner of the article or Receive free email alerts when new articles cite this article- sign up in the box at the ..."
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This article cites 52 articles, 29 of which can be accessed free at: service Email alerting click heretop right corner of the article or Receive free email alerts when new articles cite this article- sign up in the box at the
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