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Computational Tools for Protein-DNA Interactions How Many Binding Proteins Exist?

by Christopher Kauffman , George Karypis
"... Abstract Interactions between DNA and proteins are central to living systems, and characterizing how and when they occur would greatly enhance our understanding of working genomes. We review the different computational problems associated with protein-DNA interactions and the various methods used t ..."
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Abstract Interactions between DNA and proteins are central to living systems, and characterizing how and when they occur would greatly enhance our understanding of working genomes. We review the different computational problems associated with protein-DNA interactions and the various methods used

Active Mask Framework for Segmentation of Fluorescence Microscope Images

by Gowri Srinivasa, Advisor Prof, Prof Matthew, C. Fickus, Prof Adam, D. Linstedt, Prof Robert, F. Murphy
"... m]]l]]s¶D]]¿÷mB]iv]b]oD]m¶¨]iv]§]iv]r]j]t¿rv]]irj]]t]]m] / | ap]]r¿]ÎNy]s¶D]]mb¶r]ix} Û]Ix]]rd]mb]} p—N]t]o%ism] in]ty]m] / || Û]Is]¡uÎc]rN]]riv]nd]p]*N]m]st¶ I always bow to Śri ̄ Śāradāmbā, the limitless ocean of the nectar of compassion, who bears a rosary, a vessel of nectar, the symbol of ..."
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m]]l]]s¶D]]¿÷mB]iv]b]oD]m¶¨]iv]§]iv]r]j]t¿rv]]irj]]t]]m] / | ap]]r¿]ÎNy]s¶D]]mb¶r]ix} Û]Ix]]rd]mb]} p—N]t]o%ism] in]ty]m] / || Û]Is]¡uÎc]rN]]riv]nd]p]*N]m]st¶ I always bow to Śri ̄ Śāradāmbā, the limitless ocean of the nectar of compassion, who bears a rosary, a vessel of nectar, the symbol of knowledge and a book in Her lotus hands. Dedicated to the Lotus Feet of the revered Sadguru. This thesis presents a new active mask (AM) framework and an algorithm for segmenta-tion of digital images, particularly those of punctate patterns from fluorescence microscopy. Fluorescence microscopy has greatly facilitated the task of understanding complex sys-tems at cellular and molecular levels in recent years. Segmentation, an important yet dif-ficult problem, is often the first processing step following acquisition. Our team previously demonstrated that a stochastic active contour based algorithm together with the concept of

Perspective An Online Bioinformatics Curriculum

by David B. Searls
"... Abstract: Online learning initia-tives over the past decade have become increasingly comprehen-sive in their selection of courses and sophisticated in their presen-tation, culminating in the recent announcement of a number of consortium and startup activities that promise to make a university educat ..."
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Abstract: Online learning initia-tives over the past decade have become increasingly comprehen-sive in their selection of courses and sophisticated in their presen-tation, culminating in the recent announcement of a number of consortium and startup activities that promise to make a university education on the internet, free of charge, a real possibility. At this pivotal moment it is appropriate to explore the potential for obtaining comprehensive bioinformatics training with currently existing free video resources. This article pre-sents such a bioinformatics curric-ulum in the form of a virtual course catalog, together with editorial commentary, and an assessment of strengths, weaknesses, and likely future directions for open online learning in this field. Online Learning Comes of Age Online academic ‘‘courseware’ ’ at the university level has now been available to the public for a decade, the earliest concerted effort having originated in 2002 with the Massachusetts Institute of Technology (MIT) and their OpenCour-seWare initiative

DOI: 10.1140/epjst/e2012-01529-y THE EUROPEAN PHYSICAL JOURNAL SPECIAL TOPICS Review Active Brownian Particles From Individual to Collective Stochastic Dynamics

by P. Romanczuk, W. Ebeling, B. Lindner , 2012
"... Abstract. We review theoretical models of individual motility as well as collective dynamics and pattern formation of active particles. We focus on simple models of active dynamics with a particular emphasis on nonlinear and stochastic dynamics of such self-propelled entities in the framework of sta ..."
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Abstract. We review theoretical models of individual motility as well as collective dynamics and pattern formation of active particles. We focus on simple models of active dynamics with a particular emphasis on nonlinear and stochastic dynamics of such self-propelled entities in the framework

port Vector Machines, Kernel Fisher Discriminant analysis

by Sebastian Mika, Koji Tsuda
"... Abstract | This review provides an introduction to Sup- ..."
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Abstract | This review provides an introduction to Sup-

The past, present, and future of immune repertoire biology—the rise of next-generation repertoire analysis. Front Immunol 4

by Adrien Six , Maria Encarnita Mariotti-Ferrandiz , Wahiba Chaara , Susana Magadan , Hang-Phuong Pham , Marie-Paule Lefranc , Thierry Mora , Véronique Thomas-Vaslin , Aleksandra M Walczak , Pierre Boudinot , Koji Yasutomo , 2013
"... T and B cell repertoires are collections of lymphocytes, each characterized by its antigenspecific receptor. We review here classical technologies and analysis strategies developed to assess immunoglobulin (IG) and T cell receptor (TR) repertoire diversity, and describe recent advances in the field ..."
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repertoire descriptions at the protein level for the identification of IG reactivities, IG/TR CDR3 spectratyping strategies, and related molecular quantification or dynamics of T/B cell differentiation. Additionally, we introduce the recent technological advances in molecular biology tools allowing deeper

Approved by:

by Christopher Charles Weigle, Russell M. Taylor Ii, Elizabeth Bullitt Reader, Christopher G. Healey, Stephen M. Pizer, Mary Whitton, Reader C, Christopher Charles Weigle , 2006
"... ii iii CHRISTOPHER CHARLES WEIGLE: Displays for Exploration and Comparison of Nested ..."
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ii iii CHRISTOPHER CHARLES WEIGLE: Displays for Exploration and Comparison of Nested

BDRS PRICE DESCRIPTOR,

by unknown authors
"... This report focuses on the evidence about the health.consequences of smoking for women, and is intended to serve.the public health and medical communities as 'a unified source of existing scientific research. The major issues about tobacco use and women's health are examined, including tre ..."
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This report focuses on the evidence about the health.consequences of smoking for women, and is intended to serve.the public health and medical communities as 'a unified source of existing scientific research. The major issues about tobacco use and women's health are examined, including trends in consumption, biomedical evidence, and determinants of smoking ititiation, maintenance, and cessation. The biomedical aspects ofsmoking are presented in terms of mortality, morbiplity, cardiovasculaidiseases, cancer, pregnancy and infant,health,, Teptic ulcer disease, drug reactions and, interactions, food constituents, and responses to,diagnostic tests. The psychosocial and behavioraj. aspects, of smoking in women are discussed, along with the docffiented increases in- the risk of contracting lung cancer, heart,disease, or lung disease. The harmful effects of pregnant mothers smoking behaviors, are also docudented. Adhitionally, recent data are enumerated to indicate a trend of,decreasing tobacco usage among women in response to the warnings of the gavernMent, voluntary agencie, and physicrins. (Author /NRB)' DOCUMENT RESUME cc 015 465

von:

by Arbeitselektroden Und Heizgeneratoren, Mathematisch-naturwissenschaftlichen Fakultät Der, Universität Rostock, Dipl. -chem Falko Wachholz, J. W. Goethe, Wilhelm Meisters W, Erjahre Danksagung , 2009
"... Die Theorie an und für sich ist nichts nütze, als insofern sie uns den Zusammenhang der Erscheinungen glauben macht. ..."
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Die Theorie an und für sich ist nichts nütze, als insofern sie uns den Zusammenhang der Erscheinungen glauben macht.

AGR 05

by Università Degli, Studi Della Tuscia, Dottorato Di Ricerca, Candidato Tutori, Alessandra Lagomarsino, Prof Paolo, De Angelis, Prof Stefano Grego, Prof Paolo, De Angelis
"... Responses of soil biological processes to elevated atmospheric [CO2] and nitrogen addition in a poplar plantation ..."
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Responses of soil biological processes to elevated atmospheric [CO2] and nitrogen addition in a poplar plantation
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