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BIOINFORMATICS ORIGINAL PAPER Systems biology
"... Pathway analysis using random forests classification and regression Vol. 22 no. 16 2006, pages 2028–2036 doi:10.1093/bioinformatics/btl344 ..."
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Pathway analysis using random forests classification and regression Vol. 22 no. 16 2006, pages 2028–2036 doi:10.1093/bioinformatics/btl344
Least angle regression
- Ann. Statist
"... The purpose of model selection algorithms such as All Subsets, Forward Selection and Backward Elimination is to choose a linear model on the basis of the same set of data to which the model will be applied. Typically we have available a large collection of possible covariates from which we hope to s ..."
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Cited by 1308 (43 self)
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to select a parsimonious set for the efficient prediction of a response variable. Least Angle Regression (LARS), a new model selection algorithm, is a useful and less greedy version of traditional forward selection methods. Three main properties are derived: (1) A simple modification of the LARS algorithm
Projection Pursuit Regression
- Journal of the American Statistical Association
, 1981
"... A new method for nonparametric multiple regression is presented. The procedure models the regression surface as a sum of general- smooth functions of linear combinations of the predictor variables in an iterative manner. It is more general than standard stepwise and stagewise regression procedures, ..."
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Cited by 555 (6 self)
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A new method for nonparametric multiple regression is presented. The procedure models the regression surface as a sum of general- smooth functions of linear combinations of the predictor variables in an iterative manner. It is more general than standard stepwise and stagewise regression procedures
Inducing Features of Random Fields
- IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE
, 1997
"... We present a technique for constructing random fields from a set of training samples. The learning paradigm builds increasingly complex fields by allowing potential functions, or features, that are supported by increasingly large subgraphs. Each feature has a weight that is trained by minimizing the ..."
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Cited by 664 (14 self)
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the Kullback-Leibler divergence between the model and the empirical distribution of the training data. A greedy algorithm determines how features are incrementally added to the field and an iterative scaling algorithm is used to estimate the optimal values of the weights. The random field models and techniques
DART: Directed automated random testing
- In Programming Language Design and Implementation (PLDI
, 2005
"... We present a new tool, named DART, for automatically testing software that combines three main techniques: (1) automated extraction of the interface of a program with its external environment using static source-code parsing; (2) automatic generation of a test driver for this interface that performs ..."
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Cited by 823 (41 self)
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that performs random testing to simulate the most general environment the program can operate in; and (3) dynamic analysis of how the program behaves under random testing and automatic generation of new test inputs to direct systematically the execution along alternative program paths. Together, these three
An extensive empirical study of feature selection metrics for text classification
- J. of Machine Learning Research
, 2003
"... Machine learning for text classification is the cornerstone of document categorization, news filtering, document routing, and personalization. In text domains, effective feature selection is essential to make the learning task efficient and more accurate. This paper presents an empirical comparison ..."
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Cited by 483 (15 self)
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Machine learning for text classification is the cornerstone of document categorization, news filtering, document routing, and personalization. In text domains, effective feature selection is essential to make the learning task efficient and more accurate. This paper presents an empirical comparison
Gaussian processes for machine learning
- in: Adaptive Computation and Machine Learning
, 2006
"... Abstract. We give a basic introduction to Gaussian Process regression models. We focus on understanding the role of the stochastic process and how it is used to define a distribution over functions. We present the simple equations for incorporating training data and examine how to learn the hyperpar ..."
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Cited by 631 (2 self)
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the hyperparameters using the marginal likelihood. We explain the practical advantages of Gaussian Process and end with conclusions and a look at the current trends in GP work. Supervised learning in the form of regression (for continuous outputs) and classification (for discrete outputs) is an important constituent
The unity and diversity of executive functions and their contributions to complex “Frontal Lobe” tasks: a latent variable analysis
- Cognit Psychol
, 2000
"... This individual differences study examined the separability of three often postu-lated executive functions—mental set shifting (‘‘Shifting’’), information updating and monitoring (‘‘Updating’’), and inhibition of prepotent responses (‘‘Inhibi-tion’’)—and their roles in complex ‘‘frontal lobe’ ’ or ‘ ..."
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Cited by 626 (9 self)
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), random number generation (RNG), operation span, and dual tasking. Confirmatory factor analysis indicated that the three target executive functions are moderately correlated with one another, but are clearly sepa-rable. Moreover, structural equation modeling suggested that the three functions
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