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A Bayesian Framework for the Analysis of Microarray Expression Data: Regularized t-Test and Statistical Inferences of Gene Changes

by Pierre Baldi, Anthony D. Long - Bioinformatics , 2001
"... Motivation: DNA microarrays are now capable of providing genome-wide patterns of gene expression across many different conditions. The first level of analysis of these patterns requires determining whether observed differences in expression are significant or not. Current methods are unsatisfactory ..."
Abstract - Cited by 491 (6 self) - Add to MetaCart
distributions, parameterized by corresponding means and variances with hierarchical prior distributions. We derive point estimates for both parameters and hyperparameters, and regularized expressions for the variance of each gene by combining the empirical variance with a local background variance associated

A Parametric Texture Model based on Joint Statistics of Complex Wavelet Coefficients

by Javier Portilla, Eero P. Simoncelli - INTERNATIONAL JOURNAL OF COMPUTER VISION , 2000
"... We present a universal statistical model for texture images in the context of an overcomplete complex wavelet transform. The model is parameterized by a set of statistics computed on pairs of coefficients corresponding to basis functions at adjacent spatial locations, orientations, and scales. We de ..."
Abstract - Cited by 424 (13 self) - Add to MetaCart
We present a universal statistical model for texture images in the context of an overcomplete complex wavelet transform. The model is parameterized by a set of statistics computed on pairs of coefficients corresponding to basis functions at adjacent spatial locations, orientations, and scales. We

Linear Regression Limit Theory for Nonstationary Panel Data

by Peter C. B. Phillips, Hyungsik R. Moon - ECONOMETRICA , 1999
"... This paper develops a regression limit theory for nonstationary panel data with large numbers of cross section Ž n. and time series Ž T. observations. The limit theory allows for both sequential limits, wherein T� � followed by n��, and joint limits where T, n�� simultaneously; and the relationship ..."
Abstract - Cited by 312 (22 self) - Add to MetaCart
vectors when there is no individual time series cointegration and when there is heterogeneous cointegration. These relations are parameterized in terms of the matrix regression coefficient of the long-run average covariance matrix. In the case of homogeneous and near homogeneous cointegrating panels, a

The Advanced Regional Prediction System (ARPS) -- A multi-scale . . .

by M. Xue, et al. , 2001
"... ... numerical solution procedures and the parameterizations of subgrid-scale and PBL turbulence of the Advanced Regional Prediction System (ARPS) were described. The dynamic and numerical framework of the model was verified using idealized and real mountain flow cases and an idealized density curren ..."
Abstract - Cited by 290 (131 self) - Add to MetaCart
current. In this Part II, we present the treatment of other physics processes and the related verifications. The PBL and surface layer parameterization, the soil model and the atmospheric radiation packages are tested in a fully coupled mode to simulate the development and evolution of the PBL over a 48

IMPORTANT: A framework to systematically analyze the Impact of Mobility on Performance of RouTing protocols for Adhoc NeTworks

by Fan Bai, Narayanan Sadagopan, Ahmed Helmy - IEEE INFOCOM , 2003
"... Abstract — A Mobile Ad hoc Network (MANET) is a collection of wireless mobile nodes forming a temporary network without using any existing infrastructure. Since not many MANETs are currently deployed, research in this area is mostly simulation based. Random Waypoint is the commonly used mobility mod ..."
Abstract - Cited by 299 (18 self) - Add to MetaCart
mobility models on the performance of MANET routing protocols. We propose various protocol independent metrics to capture interesting mobility characteristics, including spatial and temporal dependence and geographic restrictions. In addition, a rich set of parameterized mobility models is introduced

Automated Extraction and Parameterization of Motions in Large Data Sets

by Lucas Kovar - ACM Transactions on Graphics , 2004
"... Large motion data sets often contain many variants of the same kind of motion, but without appropriate tools it is difficult to fully exploit this fact. This paper provides automated methods for identifying logically similar motions in a data set and using them to build a continuous and intuitively ..."
Abstract - Cited by 183 (2 self) - Add to MetaCart
parameterized space of motions. To find logically similar motions that are numerically dissimilar, our search method employs a novel distance metric to find “close ” motions and then uses them as intermediaries to find more distant motions. Search queries are answered at interactive speeds through a

Coverage Criteria for GUI Testing

by Atif M. Memon, Mary Lou Soffa, Martha E. Pollack - In Proceedings of the 8th European Software Engineering Conference (ESEC) and 9th ACM SIGSOFT International Symposium on the Foundations of Software Engineering (FSE-9 , 2001
"... The widespread recognition of the usefulness of graphical user interfaces (GUIs) has established their importance as critical components of today's software. GUIs have characteristics different from traditional software, and conventional testing techniques do not apply directly to GUI software. ..."
Abstract - Cited by 68 (19 self) - Add to MetaCart
The widespread recognition of the usefulness of graphical user interfaces (GUIs) has established their importance as critical components of today's software. GUIs have characteristics different from traditional software, and conventional testing techniques do not apply directly to GUI software

Automated test oracles for guis

by Atif Memon, Mary Soffa, Mary Pollack, {atif M. Memon, Martha E. Pollack, Mary Lou Soffa - SIGSOFT Softw. Eng. Notes
"... This paper describes the use of an automated oracle to test the expected behavior of a GUI. The automation occurs both in the derivation of what the expected states of the GUI are and in the comparison of those expected states to the actual state of the GUI as it is being executed. The authors achie ..."
Abstract - Cited by 66 (14 self) - Add to MetaCart
This paper describes the use of an automated oracle to test the expected behavior of a GUI. The automation occurs both in the derivation of what the expected states of the GUI are and in the comparison of those expected states to the actual state of the GUI as it is being executed. The authors

Development and testing of a general amber force field.

by Junmei Wang , Romain M Wolf , James W Caldwell , Peter A Kollman , David A Case - J Comput Chem;25:1157–1174. , 2004
"... Abstract: We describe here a general Amber force field (GAFF) for organic molecules. GAFF is designed to be compatible with existing Amber force fields for proteins and nucleic acids, and has parameters for most organic and pharmaceutical molecules that are composed of H, C, N, O, S, P, and halogen ..."
Abstract - Cited by 214 (4 self) - Add to MetaCart
, and halogens. It uses a simple functional form and a limited number of atom types, but incorporates both empirical and heuristic models to estimate force constants and partial atomic charges. The performance of GAFF in test cases is encouraging. In test I, 74 crystallographic structures were compared to GAFF

GUI Testing

by Qing Xie, Qing Xie , 2006
"... Most of today’s software users interact with the software through a graphical user interface (GUI), which constitutes as much as 45-60 % of the total code. The correct-ness of the GUI is necessary to ensure the correctness of the overall software. Although GUIs have become ubiquitous, testing GUIs f ..."
Abstract - Add to MetaCart
Most of today’s software users interact with the software through a graphical user interface (GUI), which constitutes as much as 45-60 % of the total code. The correct-ness of the GUI is necessary to ensure the correctness of the overall software. Although GUIs have become ubiquitous, testing GUIs
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