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An important question in neuroevolution is how to gain an advantage from evolving neural network topologies along with weights. We present a method, NeuroEvolution of Augmenting Topologies (NEAT), which outperforms the best fixed-topology method on a challenging benchmark reinforcement learning

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and phonological representations that capture better the relevant structure among the written and spoken forms of words. In a number of simulation experiments, networks using the new representations learn to read both regular and exception words, including low-frequency exception words, and yet are still able

The proliferation of topic hierarchies for text documents has resulted in a need for tools that automatically classify new documents within such hierarchies. Existing classification schemes which ignore the hierarchical structure and treat the topics as separate classes are often inadequate in text classification where the there is a large number of classes and a huge number of relevant features needed to distinguish between them. We propose an approach that utilizes the hierarchical topic structure to decompose the classification task into a set of simpler problems, one at each node in the classification tree. As we show, each of these smaller problems can be solved accurately by focusing only on a very small set of features, those relevant to the task at hand. This set of relevant features varies widely throughout the hierarchy, so that, while the overall relevant feature set may be large, each classifier only examines a small subset. The use of reduced feature sets allows us to util...

review. Views or opinions expressed herein do not necessarily represent those of the Institute, its National Member Organizations, or other organizations supporting the work. IIASA STUDIES IN ADAPTIVE DYNAMICS NO. 27 The Adaptive Dynamics Network at IIASA fosters the development of new mathematical

enhancing their sensitivity to weak similarities. A new criterion for triggering the extension of word hits, combined with a new heuristic for generating gapped alignments, yields a gapped BLAST program that runs at approximately three times the speed of the original. In addition, a method is introduced

We have developed a new method for identification of signal peptides and their cleavage sites based on neural networks trained on separate sets of prokaryotic and eukaryotic sequences. The method performs significantly better than previous prediction schemes, and can easily be applied on genome

of basic concepts of information consensus in networks and methods of convergence and performance analysis for the algorithms are provided. Our analysis framework is based on tools from matrix theory, algebraic graph theory, and control theory. We discuss the connections between consensus problems

were used as baselines, since they were evaluated on all versions of Reuters that exclude the unlabelled documents. As a global observation, kNN, LLSF and a neural network method had the best performance; except for a Naive Bayes approach, the other learning algorithms also performed relatively well.