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Limma: linear models for microarray data
 Bioinformatics and Computational Biology Solutions using R and Bioconductor
, 2005
"... This free opensource software implements academic research by the authors and coworkers. If you use it, please support the project by citing the appropriate journal articles listed in Section 2.1.Contents ..."
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Cited by 759 (13 self)
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This free opensource software implements academic research by the authors and coworkers. If you use it, please support the project by citing the appropriate journal articles listed in Section 2.1.Contents
Linear pattern matching algorithms
 IN PROCEEDINGS OF THE 14TH ANNUAL IEEE SYMPOSIUM ON SWITCHING AND AUTOMATA THEORY. IEEE
, 1972
"... In 1970, Knuth, Pratt, and Morris [1] showed how to do basic pattern matching in linear time. Related problems, such as those discussed in [4], have previously been solved by efficient but suboptimal algorithms. In this paper, we introduce an interesting data structure called a bitree. A linear ti ..."
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Cited by 549 (0 self)
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In 1970, Knuth, Pratt, and Morris [1] showed how to do basic pattern matching in linear time. Related problems, such as those discussed in [4], have previously been solved by efficient but suboptimal algorithms. In this paper, we introduce an interesting data structure called a bitree. A linear
SupportVector Networks
 Machine Learning
, 1995
"... The supportvector network is a new learning machine for twogroup classification problems. The machine conceptually implements the following idea: input vectors are nonlinearly mapped to a very highdimension feature space. In this feature space a linear decision surface is constructed. Special pr ..."
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Cited by 3621 (35 self)
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The supportvector network is a new learning machine for twogroup classification problems. The machine conceptually implements the following idea: input vectors are nonlinearly mapped to a very highdimension feature space. In this feature space a linear decision surface is constructed. Special
Training Support Vector Machines: an Application to Face Detection
, 1997
"... We investigate the application of Support Vector Machines (SVMs) in computer vision. SVM is a learning technique developed by V. Vapnik and his team (AT&T Bell Labs.) that can be seen as a new method for training polynomial, neural network, or Radial Basis Functions classifiers. The decision sur ..."
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Cited by 728 (1 self)
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surfaces are found by solving a linearly constrained quadratic programming problem. This optimization problem is challenging because the quadratic form is completely dense and the memory requirements grow with the square of the number of data points. We present a decomposition algorithm that guarantees
Lambertian Reflectance and Linear Subspaces
, 2000
"... We prove that the set of all reflectance functions (the mapping from surface normals to intensities) produced by Lambertian objects under distant, isotropic lighting lies close to a 9D linear subspace. This implies that, in general, the set of images of a convex Lambertian object obtained under a wi ..."
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Cited by 514 (20 self)
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We prove that the set of all reflectance functions (the mapping from surface normals to intensities) produced by Lambertian objects under distant, isotropic lighting lies close to a 9D linear subspace. This implies that, in general, the set of images of a convex Lambertian object obtained under a
An Extended Set of Fortran Basic Linear Algebra Subprograms
 ACM TRANSACTIONS ON MATHEMATICAL SOFTWARE
, 1986
"... This paper describes an extension to the set of Basic Linear Algebra Subprograms. The extensions are targeted at matrixvector operations which should provide for efficient and portable implementations of algorithms for high performance computers. ..."
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Cited by 526 (72 self)
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This paper describes an extension to the set of Basic Linear Algebra Subprograms. The extensions are targeted at matrixvector operations which should provide for efficient and portable implementations of algorithms for high performance computers.
Sparse Bayesian Learning and the Relevance Vector Machine
, 2001
"... This paper introduces a general Bayesian framework for obtaining sparse solutions to regression and classication tasks utilising models linear in the parameters. Although this framework is fully general, we illustrate our approach with a particular specialisation that we denote the `relevance vec ..."
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Cited by 958 (5 self)
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This paper introduces a general Bayesian framework for obtaining sparse solutions to regression and classication tasks utilising models linear in the parameters. Although this framework is fully general, we illustrate our approach with a particular specialisation that we denote the `relevance
Knowledgebased Analysis of Microarray Gene Expression Data By Using Support Vector Machines
, 2000
"... We introduce a method of functionally classifying genes by using gene expression data from DNA microarray hybridization experiments. The method is based on the theory of support vector machines (SVMs). SVMs are considered a supervised computer learning method because they exploit prior knowledge of ..."
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Cited by 514 (8 self)
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We introduce a method of functionally classifying genes by using gene expression data from DNA microarray hybridization experiments. The method is based on the theory of support vector machines (SVMs). SVMs are considered a supervised computer learning method because they exploit prior knowledge
Support Vector Machine Classification and Validation of Cancer Tissue Samples Using Microarray Expression Data
, 2000
"... Motivation: DNA microarray experiments generating thousands of gene expression measurements, are being used to gather information from tissue and cell samples regarding gene expression differences that will be useful in diagnosing disease. We have developed a new method to analyse this kind of data ..."
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Cited by 566 (1 self)
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using support vector machines (SVMs). This analysis consists of both classification of the tissue samples, and an exploration of the data for mislabeled or questionable tissue results. Results: We demonstrate the method in detail on samples consisting of ovarian cancer tissues, normal ovarian tissues
A practical guide to support vector classification
, 2010
"... The support vector machine (SVM) is a popular classification technique. However, beginners who are not familiar with SVM often get unsatisfactory results since they miss some easy but significant steps. In this guide, we propose a simple procedure which usually gives reasonable results. ..."
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Cited by 787 (7 self)
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The support vector machine (SVM) is a popular classification technique. However, beginners who are not familiar with SVM often get unsatisfactory results since they miss some easy but significant steps. In this guide, we propose a simple procedure which usually gives reasonable results.
Results 1  10
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