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Application of Phylogenetic Networks in Evolutionary Studies

by Daniel H. Huson, David Bryant - SUBMITTED TO MBE 2005 , 2005
"... The evolutionary history of a set of taxa is usually represented by a phylogenetic tree, and this model has greatly facilitated the discussion and testing of hypotheses. However, it is well known that more complex evolutionary scenarios are poorly described by such models. Further, even when evoluti ..."
Abstract - Cited by 887 (15 self) - Add to MetaCart
The evolutionary history of a set of taxa is usually represented by a phylogenetic tree, and this model has greatly facilitated the discussion and testing of hypotheses. However, it is well known that more complex evolutionary scenarios are poorly described by such models. Further, even when

Inductive-Data-Type Systems

by Frederic Blanqui, Jean-Pierre Jouannaud, Mitsuhiro Okada , 2002
"... In a previous work ("Abstract Data Type Systems", TCS 173(2), 1997), the leI two authors presented a combined lmbined made of a (strongl normal3zG9 alrmal rewrite system and a typed #-calA#Ik enriched by pattern-matching definitions folnitio a certain format,calat the "General Schem ..."
Abstract - Cited by 821 (23 self) - Add to MetaCart
In a previous work ("Abstract Data Type Systems", TCS 173(2), 1997), the leI two authors presented a combined lmbined made of a (strongl normal3zG9 alrmal rewrite system and a typed #-calA#Ik enriched by pattern-matching definitions folnitio a certain format,calat the "

Mega: molecular evolutionary genetic analysis software for microcomputers

by Sudhir Kumar, Koichiro Tamura, Masatoshi Nei - CABIOS , 1994
"... A computer program package called MEGA has been developed for estimating evolutionary distances, reconstructing phylogenetic trees and computing basic statistical quantities from molecular data. It is written in C+ + and is intended to be used on IBM and IBM-compatible personal computers. In this pr ..."
Abstract - Cited by 505 (10 self) - Add to MetaCart
A computer program package called MEGA has been developed for estimating evolutionary distances, reconstructing phylogenetic trees and computing basic statistical quantities from molecular data. It is written in C+ + and is intended to be used on IBM and IBM-compatible personal computers

Models and issues in data stream systems

by Brian Babcock, Shivnath Babu, Mayur Datar, Rajeev Motwani, Jennifer Widom - IN PODS , 2002
"... In this overview paper we motivate the need for and research issues arising from a new model of data processing. In this model, data does not take the form of persistent relations, but rather arrives in multiple, continuous, rapid, time-varying data streams. In addition to reviewing past work releva ..."
Abstract - Cited by 786 (19 self) - Add to MetaCart
relevant to data stream systems and current projects in the area, the paper explores topics in stream query languages, new requirements and challenges in query processing, and algorithmic issues.

MEGA5: Molecular evolutionary genetics analysis using maximum . . .

by Koichiro Tamura, Daniel Peterson, Nicholas Peterson, Glen Stecher, Masatoshi Nei, Sudhir Kumar , 2011
"... Comparative analysis of molecular sequence data is essential for reconstructing the evolutionary histories of species and inferring the nature and extent of selective forces shaping the evolution of genes and species. Here, we announce the release of Molecular Evolutionary Genetics Analysis version ..."
Abstract - Cited by 7284 (25 self) - Add to MetaCart
Comparative analysis of molecular sequence data is essential for reconstructing the evolutionary histories of species and inferring the nature and extent of selective forces shaping the evolution of genes and species. Here, we announce the release of Molecular Evolutionary Genetics Analysis version

Multiobjective evolutionary algorithms: a comparative case study and the strength pareto approach

by Eckart Zitzler, Lothar Thiele - IEEE TRANSACTIONS ON EVOLUTIONARY COMPUTATION , 1999
"... Evolutionary algorithms (EA’s) are often well-suited for optimization problems involving several, often conflicting objectives. Since 1985, various evolutionary approaches to multiobjective optimization have been developed that are capable of searching for multiple solutions concurrently in a singl ..."
Abstract - Cited by 813 (22 self) - Add to MetaCart
Evolutionary algorithms (EA’s) are often well-suited for optimization problems involving several, often conflicting objectives. Since 1985, various evolutionary approaches to multiobjective optimization have been developed that are capable of searching for multiple solutions concurrently in a

Data Security

by Dorothy E. Denning, Peter J. Denning , 1979
"... The rising abuse of computers and increasing threat to personal privacy through data banks have stimulated much interest m the techmcal safeguards for data. There are four kinds of safeguards, each related to but distract from the others. Access controls regulate which users may enter the system and ..."
Abstract - Cited by 615 (3 self) - Add to MetaCart
The rising abuse of computers and increasing threat to personal privacy through data banks have stimulated much interest m the techmcal safeguards for data. There are four kinds of safeguards, each related to but distract from the others. Access controls regulate which users may enter the system

Data networks

by L. Verger G, E. Gros D'aillon G, P. Major H, G. Németh H , 1992
"... a b s t r a c t In this paper we illustrate the core technologies at the basis of the European SPADnet project (www. spadnet.eu), and present the corresponding first results. SPADnet is aimed at a new generation of MRI-compatible, scalable large area image sensors, based on CMOS technology, that are ..."
Abstract - Cited by 2210 (5 self) - Add to MetaCart
, that are networked to perform gamma-ray detection and coincidence to be used primarily in (Time-of-Flight) Positron Emission Tomography (PET). The project innovates in several areas of PET systems, from optical coupling to single-photon sensor architectures, from intelligent ring networks to reconstruction

Bigtable: A distributed storage system for structured data

by Fay Chang, Jeffrey Dean, Sanjay Ghemawat, Wilson C. Hsieh, Deborah A. Wallach, Mike Burrows, Tushar Chandra, Andrew Fikes, Robert E. Gruber - IN PROCEEDINGS OF THE 7TH CONFERENCE ON USENIX SYMPOSIUM ON OPERATING SYSTEMS DESIGN AND IMPLEMENTATION - VOLUME 7 , 2006
"... Bigtable is a distributed storage system for managing structured data that is designed to scale to a very large size: petabytes of data across thousands of commodity servers. Many projects at Google store data in Bigtable, including web indexing, Google Earth, and Google Finance. These applications ..."
Abstract - Cited by 1028 (4 self) - Add to MetaCart
Bigtable is a distributed storage system for managing structured data that is designed to scale to a very large size: petabytes of data across thousands of commodity servers. Many projects at Google store data in Bigtable, including web indexing, Google Earth, and Google Finance. These applications

Data Mining: Concepts and Techniques

by Jiawei Han, Micheline Kamber , 2000
"... Our capabilities of both generating and collecting data have been increasing rapidly in the last several decades. Contributing factors include the widespread use of bar codes for most commercial products, the computerization of many business, scientific and government transactions and managements, a ..."
Abstract - Cited by 3142 (23 self) - Add to MetaCart
, and advances in data collection tools ranging from scanned texture and image platforms, to on-line instrumentation in manufacturing and shopping, and to satellite remote sensing systems. In addition, popular use of the World Wide Web as a global information system has flooded us with a tremendous amount
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