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Efficient Parallel Computations for Singular Band Matrices
"... . Efficient parallel algorithms are presented for singular band matrix computations over arbitrary fields  including solving systems of linear equations, and computation of the rank and a maximal nonsingular minor of a nonsingular band matrix. The algorithms are reasonably fast: for computations ..."
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. Efficient parallel algorithms are presented for singular band matrix computations over arbitrary fields  including solving systems of linear equations, and computation of the rank and a maximal nonsingular minor of a nonsingular band matrix. The algorithms are reasonably fast
Parallel Numerical Linear Algebra
, 1993
"... We survey general techniques and open problems in numerical linear algebra on parallel architectures. We first discuss basic principles of parallel processing, describing the costs of basic operations on parallel machines, including general principles for constructing efficient algorithms. We illust ..."
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Cited by 766 (23 self)
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, the nonsymmetric eigenvalue problem, and the singular value decomposition. We consider dense, band and sparse matrices.
LogP: Towards a Realistic Model of Parallel Computation
, 1993
"... A vast body of theoretical research has focused either on overly simplistic models of parallel computation, notably the PRAM, or overly specific models that have few representatives in the real world. Both kinds of models encourage exploitation of formal loopholes, rather than rewarding developme ..."
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Cited by 562 (15 self)
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the computing bandwidth, the communication bandwidth, the communication delay, and the efficiency of coupling communication and computation. Portable parallel algorithms typically adapt to the machine configuration, in terms of these parameters. The utility of the model is demonstrated through examples
A Singular Value Thresholding Algorithm for Matrix Completion
, 2008
"... This paper introduces a novel algorithm to approximate the matrix with minimum nuclear norm among all matrices obeying a set of convex constraints. This problem may be understood as the convex relaxation of a rank minimization problem, and arises in many important applications as in the task of reco ..."
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Cited by 539 (20 self)
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toimplement algorithm that is extremely efficient at addressing problems in which the optimal solution has low rank. The algorithm is iterative and produces a sequence of matrices {X k, Y k} and at each step, mainly performs a softthresholding operation on the singular values of the matrix Y k. There are two
Fast Parallel Algorithms for ShortRange Molecular Dynamics
 JOURNAL OF COMPUTATIONAL PHYSICS
, 1995
"... Three parallel algorithms for classical molecular dynamics are presented. The first assigns each processor a fixed subset of atoms; the second assigns each a fixed subset of interatomic forces to compute; the third assigns each a fixed spatial region. The algorithms are suitable for molecular dyn ..."
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Cited by 622 (6 self)
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Three parallel algorithms for classical molecular dynamics are presented. The first assigns each processor a fixed subset of atoms; the second assigns each a fixed subset of interatomic forces to compute; the third assigns each a fixed spatial region. The algorithms are suitable for molecular
UNet: A UserLevel Network Interface for Parallel and Distributed Computing
 In Fifteenth ACM Symposium on Operating System Principles
, 1995
"... The UNet communication architecture provides processes with a virtual view of a network interface to enable userlevel access to highspeed communication devices. The architecture, implemented on standard workstations using offtheshelf ATM communication hardware, removes the kernel from the communi ..."
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Cited by 596 (17 self)
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, as well as novel abstractions like Active Messages can be implemented efficiently. A UNet prototype on an 8node ATM cluster of standard workstations offers 65 microseconds roundtrip latency and 15 Mbytes/sec bandwidth. It achieves TCP performance at maximum network bandwidth and demonstrates
Superconformal field theory on threebranes at a CalabiYau singularity
 Nucl. Phys. B
, 1998
"... Just as parallel threebranes on a smooth manifold are related to string theory on AdS5 × S 5, parallel threebranes near a conical singularity are related to string theory on AdS5 × X5, for a suitable X5. For the example of the conifold singularity, for which X5 = (SU(2) × SU(2))/U(1), we argue that ..."
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Cited by 690 (37 self)
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Just as parallel threebranes on a smooth manifold are related to string theory on AdS5 × S 5, parallel threebranes near a conical singularity are related to string theory on AdS5 × X5, for a suitable X5. For the example of the conifold singularity, for which X5 = (SU(2) × SU(2))/U(1), we argue
Finding community structure in networks using the eigenvectors of matrices
, 2006
"... We consider the problem of detecting communities or modules in networks, groups of vertices with a higherthanaverage density of edges connecting them. Previous work indicates that a robust approach to this problem is the maximization of the benefit function known as “modularity ” over possible div ..."
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Cited by 500 (0 self)
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We consider the problem of detecting communities or modules in networks, groups of vertices with a higherthanaverage density of edges connecting them. Previous work indicates that a robust approach to this problem is the maximization of the benefit function known as “modularity ” over possible divisions of a network. Here we show that this maximization process can be written in terms of the eigenspectrum of a matrix we call the modularity matrix, which plays a role in community detection similar to that played by the graph Laplacian in graph partitioning calculations. This result leads us to a number of possible algorithms for detecting community structure, as well as several other results, including a spectral measure of bipartite structure in networks and a new centrality measure that identifies those vertices that occupy central positions within the communities to which they belong. The algorithms and measures proposed are illustrated with applications to a variety of realworld complex networks.
Good ErrorCorrecting Codes based on Very Sparse Matrices
, 1999
"... We study two families of errorcorrecting codes defined in terms of very sparse matrices. "MN" (MacKayNeal) codes are recently invented, and "Gallager codes" were first investigated in 1962, but appear to have been largely forgotten, in spite of their excellent properties. The ..."
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Cited by 741 (23 self)
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We study two families of errorcorrecting codes defined in terms of very sparse matrices. "MN" (MacKayNeal) codes are recently invented, and "Gallager codes" were first investigated in 1962, but appear to have been largely forgotten, in spite of their excellent properties
Dryad: Distributed DataParallel Programs from Sequential Building Blocks
 In EuroSys
, 2007
"... Dryad is a generalpurpose distributed execution engine for coarsegrain dataparallel applications. A Dryad application combines computational “vertices ” with communication “channels ” to form a dataflow graph. Dryad runs the application by executing the vertices of this graph on a set of availa ..."
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Cited by 730 (27 self)
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Dryad is a generalpurpose distributed execution engine for coarsegrain dataparallel applications. A Dryad application combines computational “vertices ” with communication “channels ” to form a dataflow graph. Dryad runs the application by executing the vertices of this graph on a set
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