Three parallel algorithms for classical molecular dynamics are presented. The first assigns each processor a fixed subset of atoms; the second assigns each a fixed subset of inter-atomic forces to compute; the third assigns each a fixed spatial region. The algorithms are suitable for molecular

Clustering, in data mining, is useful for discovering groups and identifying interesting distributions in the underlying data. Traditional clustering algorithms either favor clusters with spherical shapes and similar sizes, or are very fragile in the presence of outliers. We propose a new

Abstract-Mean shift, a simple iterative procedure that shifts each data point to the average of data points in its neighborhood, is generalized and analyzed in this paper. This generalization makes some k-means like clustering algorithms its special cases. It is shown that mean shift is a mode

Spatial data mining is the discovery of interesting relationships and characteristics that may exist implicitly in spatial databases. In this paper, we explore whether clustering methods have a role to play in spatial data mining. To this end, we develop a new clustering method called CLARANS which

nearest center. A popular heuristic for k-means clustering is Lloyd's algorithm. In this paper we present a simple and efficient implementation of Lloyd's k-means clustering algorithm, which we call the filtering algorithm. This algorithm is very easy to implement. It differs from most other

reconfigured as nodes move. This network architecture has three main advantages. First, it provides spatial reuse of the bandwidth due to node clustering. Secondly, bandwidth can be shared or reserved in a controlled fashion in each cluster. Finally, the cluster algorithm is robust in the face of topological

-gle computers, through small clusters of computers, to data centers with thousands of computers. The Dryad execution engine handles all the difficult problems of creating a large distributed, concurrent application: scheduling the use of computers and their CPUs, recovering from communication or computer

GPFS is IBM's parallel, shared-disk file system for cluster computers, available on the RS/6000 SP parallel supercomputer and on Linux clusters. GPFS is used on many of the largest supercomputers in the world. GPFS was built on many of the ideas that were developed in the academic community

This book presents a unified treatment of many different kinds of planning algorithms. The subject lies at the crossroads between robotics, control theory, artificial intelligence, algorithms, and computer graphics. The particular subjects covered include motion planning, discrete planning

We survey general techniques and open problems in numerical linear algebra on parallel architectures. We first discuss basic principles of parallel processing, describing the costs of basic operations on parallel machines, including general principles for constructing efficient algorithms. We