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78,598
Bro: A System for Detecting Network Intruders in RealTime
, 1999
"... We describe Bro, a standalone system for detecting network intruders in realtime by passively monitoring a network link over which the intruder's traffic transits. We give an overview of the system's design, which emphasizes highspeed (FDDIrate) monitoring, realtime notification, clear ..."
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Cited by 903 (41 self)
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We describe Bro, a standalone system for detecting network intruders in realtime by passively monitoring a network link over which the intruder's traffic transits. We give an overview of the system's design, which emphasizes highspeed (FDDIrate) monitoring, realtime notification
The empirical case for two systems of reasoning
, 1996
"... Distinctions have been proposed between systems of reasoning for centuries. This article distills properties shared by many of these distinctions and characterizes the resulting systems in light of recent findings and theoretical developments. One system is associative because its computations ref ..."
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Cited by 631 (4 self)
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reflect similarity structure and relations of temporal contiguity. The other is “rule based” because it operates on symbolic structures that have logical content and variables and because its computations have the properties that are normally assigned to rules. The systems serve complementary functions
Fast Folding and Comparison of RNA Secondary Structures (The Vienna RNA Package)
"... Computer codes for computation and comparison of RNA secondary structures, the Vienna RNA package, are presented, that are based on dynamic programming algorithms and aim at predictions of structures with minimum free energies as well as at computations of the equilibrium partition functions and bas ..."
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Cited by 812 (119 self)
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implementations of modified algorithms on parallel computers with distributed memory. Performance analysis carried out on an Intel Hypercube shows that parallel computing becomes gradually more and more efficient the longer the sequences are.
The Lumigraph
 In Proceedings of SIGGRAPH 96
, 1996
"... This paper discusses a new method for capturing the complete appearanceof both synthetic and real world objects and scenes, representing this information, and then using this representation to render images of the object from new camera positions. Unlike the shape capture process traditionally used ..."
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Cited by 1034 (43 self)
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This paper discusses a new method for capturing the complete appearanceof both synthetic and real world objects and scenes, representing this information, and then using this representation to render images of the object from new camera positions. Unlike the shape capture process traditionally used
On the Resemblance and Containment of Documents
 In Compression and Complexity of Sequences (SEQUENCES’97
, 1997
"... Given two documents A and B we define two mathematical notions: their resemblance r(A, B)andtheircontainment c(A, B) that seem to capture well the informal notions of "roughly the same" and "roughly contained." The basic idea is to reduce these issues to set intersection probl ..."
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Cited by 499 (7 self)
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Given two documents A and B we define two mathematical notions: their resemblance r(A, B)andtheircontainment c(A, B) that seem to capture well the informal notions of "roughly the same" and "roughly contained." The basic idea is to reduce these issues to set intersection
Usability Analysis of Visual Programming Environments: a `cognitive dimensions' framework
 JOURNAL OF VISUAL LANGUAGES AND COMPUTING
, 1996
"... The cognitive dimensions framework is a broadbrush evaluation technique for interactive devices and for noninteractive notations. It sets out a small vocabulary of terms designed to capture the cognitivelyrelevant aspects of structure, and shows how they can be traded off against each other. T ..."
Abstract

Cited by 510 (13 self)
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The cognitive dimensions framework is a broadbrush evaluation technique for interactive devices and for noninteractive notations. It sets out a small vocabulary of terms designed to capture the cognitivelyrelevant aspects of structure, and shows how they can be traded off against each other
Graphical models, exponential families, and variational inference
, 2008
"... The formalism of probabilistic graphical models provides a unifying framework for capturing complex dependencies among random variables, and building largescale multivariate statistical models. Graphical models have become a focus of research in many statistical, computational and mathematical fiel ..."
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Cited by 800 (26 self)
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The formalism of probabilistic graphical models provides a unifying framework for capturing complex dependencies among random variables, and building largescale multivariate statistical models. Graphical models have become a focus of research in many statistical, computational and mathematical
LogP: Towards a Realistic Model of Parallel Computation
, 1993
"... A vast body of theoretical research has focused either on overly simplistic models of parallel computation, notably the PRAM, or overly specific models that have few representatives in the real world. Both kinds of models encourage exploitation of formal loopholes, rather than rewarding developme ..."
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Cited by 562 (15 self)
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A vast body of theoretical research has focused either on overly simplistic models of parallel computation, notably the PRAM, or overly specific models that have few representatives in the real world. Both kinds of models encourage exploitation of formal loopholes, rather than rewarding development of techniques that yield performance across a range of current and future parallel machines. This paper offers a new parallel machine model, called LogP, that reflects the critical technology trends underlying parallel computers. It is intended to serve as a basis for developing fast, portable parallel algorithms and to offer guidelines to machine designers. Such a model must strike a balance between detail and simplicity in order to reveal important bottlenecks without making analysis of interesting problems intractable. The model is based on four parameters that specify abstractly the computing bandwidth, the communication bandwidth, the communication delay, and the efficiency of coupling communication and computation. Portable parallel algorithms typically adapt to the machine configuration, in terms of these parameters. The utility of the model is demonstrated through examples that are implemented on the CM5.
Mining Sequential Patterns: Generalizations and Performance Improvements
 Research Report RJ 9994, IBM Almaden Research
, 1995
"... Abstract. The problem of mining sequential patterns was recently introduced in [3]. We are given a database of sequences, where each sequence is a list of transactions ordered by transactiontime, and each transaction is a set of items. The problem is to discover all sequential patterns with a user ..."
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Cited by 748 (5 self)
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Abstract. The problem of mining sequential patterns was recently introduced in [3]. We are given a database of sequences, where each sequence is a list of transactions ordered by transactiontime, and each transaction is a set of items. The problem is to discover all sequential patterns with a userspeci ed minimum support, where the support of a pattern is the number of datasequences that contain the pattern. An example of a sequential pattern is \5 % of customers bought `Foundation' and `Ringworld ' in one transaction, followed by `Second Foundation ' in a later transaction". We generalize the problem as follows. First, we add time constraints that specify a minimum and/or maximum time period between adjacent elements in a pattern. Second, we relax the restriction that the items in an element of a sequential pattern must come from the same transaction, instead allowing the items to be present in a set of transactions whose transactiontimes are within a userspeci ed time window. Third, given a userde ned taxonomy (isa hierarchy) on items, we allow sequential patterns to include items across all levels of the taxonomy. We present GSP, a new algorithm that discovers these generalized sequential patterns. Empirical evaluation using synthetic and reallife data indicates that GSP is much faster than the AprioriAll algorithm presented in [3]. GSP scales linearly with the number of datasequences, and has very good scaleup properties with respect to the average datasequence size. 1
Fast Parallel Algorithms for ShortRange Molecular Dynamics
 JOURNAL OF COMPUTATIONAL PHYSICS
, 1995
"... Three parallel algorithms for classical molecular dynamics are presented. The first assigns each processor a fixed subset of atoms; the second assigns each a fixed subset of interatomic forces to compute; the third assigns each a fixed spatial region. The algorithms are suitable for molecular dyn ..."
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Cited by 622 (6 self)
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Three parallel algorithms for classical molecular dynamics are presented. The first assigns each processor a fixed subset of atoms; the second assigns each a fixed subset of interatomic forces to compute; the third assigns each a fixed spatial region. The algorithms are suitable for molecular dynamics models which can be difficult to parallelize efficiently  those with shortrange forces where the neighbors of each atom change rapidly. They can be implemented on any distributedmemory parallel machine which allows for messagepassing of data between independently executing processors. The algorithms are tested on a standard LennardJones benchmark problem for system sizes ranging from 500 to 100,000,000 atoms on several parallel supercomputers  the nCUBE 2, Intel iPSC/860 and Paragon, and Cray T3D. Comparing the results to the fastest reported vectorized Cray YMP and C90 algorithm shows that the current generation of parallel machines is competitive with conventi...
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78,598