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79,515
Software pipelining: An effective scheduling technique for VLIW machines
, 1988
"... This paper shows that software pipelining is an effective and viable scheduling technique for VLIW processors. In software pipelining, iterations of a loop in the source program are continuously initiated at constant intervals, before the preceding iterations complete. The advantage of software pipe ..."
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Cited by 579 (3 self)
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number of iterations. Hierarchical reduction comple-ments the software pipelining technique, permitting a consis-tent performance improvement be obtained. The techniques proposed have been validated by an im-plementation of a compiler for Warp, a systolic array consist-ing of 10 VLIW processors
Fast Parallel Algorithms for Short-Range Molecular Dynamics
- JOURNAL OF COMPUTATIONAL PHYSICS
, 1995
"... Three parallel algorithms for classical molecular dynamics are presented. The first assigns each processor a fixed subset of atoms; the second assigns each a fixed subset of inter-atomic forces to compute; the third assigns each a fixed spatial region. The algorithms are suitable for molecular dyn ..."
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Cited by 622 (6 self)
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dynamics models which can be difficult to parallelize efficiently -- those with short-range forces where the neighbors of each atom change rapidly. They can be implemented on any distributed--memory parallel machine which allows for message--passing of data between independently executing processors
Dryad: Distributed Data-Parallel Programs from Sequential Building Blocks
- In EuroSys
, 2007
"... Dryad is a general-purpose distributed execution engine for coarse-grain data-parallel applications. A Dryad applica-tion combines computational “vertices ” with communica-tion “channels ” to form a dataflow graph. Dryad runs the application by executing the vertices of this graph on a set of availa ..."
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Cited by 730 (27 self)
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Dryad is a general-purpose distributed execution engine for coarse-grain data-parallel applications. A Dryad applica-tion combines computational “vertices ” with communica-tion “channels ” to form a dataflow graph. Dryad runs the application by executing the vertices of this graph on a set
Simultaneous Multithreading: Maximizing On-Chip Parallelism
, 1995
"... This paper examines simultaneous multithreading, a technique permitting several independent threads to issue instructions to a superscalar’s multiple functional units in a single cycle. We present several models of simultaneous multithreading and compare them with alternative organizations: a wide s ..."
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Cited by 802 (48 self)
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is an attractive alternative to single-chip multiprocessors; simultaneous multithreaded processors with a variety of organizations outperform corresponding conventional multiprocessors with similar execution resources. While simultaneous multithreading has excellent potential to increase processor utilization
Design and Implementation or the Sun Network Filesystem
, 1985
"... this paper we discuss the design and implementation of the/'fiesystem interface in the kernel and the NF$ virtual/'fiesystem. We describe some interesting design issues and how they were resolved, and point out some of the shortcomings of the current implementation. We conclude with some i ..."
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Cited by 504 (0 self)
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this paper we discuss the design and implementation of the/'fiesystem interface in the kernel and the NF$ virtual/'fiesystem. We describe some interesting design issues and how they were resolved, and point out some of the shortcomings of the current implementation. We conclude with some
LogP: Towards a Realistic Model of Parallel Computation
, 1993
"... A vast body of theoretical research has focused either on overly simplistic models of parallel computation, notably the PRAM, or overly specific models that have few representatives in the real world. Both kinds of models encourage exploitation of formal loopholes, rather than rewarding developme ..."
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Cited by 562 (15 self)
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A vast body of theoretical research has focused either on overly simplistic models of parallel computation, notably the PRAM, or overly specific models that have few representatives in the real world. Both kinds of models encourage exploitation of formal loopholes, rather than rewarding
Parallel database systems: the future of high performance database systems
- Communications of the ACM
, 1992
"... Abstract: Parallel database machine architectures have evolved from the use of exotic hardware to a software parallel dataflow architecture based on conventional shared-nothing hardware. These new designs provide impressive speedup and scaleup when processing relational database queries. This paper ..."
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Cited by 638 (13 self)
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Abstract: Parallel database machine architectures have evolved from the use of exotic hardware to a software parallel dataflow architecture based on conventional shared-nothing hardware. These new designs provide impressive speedup and scaleup when processing relational database queries. This paper
Multiscalar Processors
- In Proceedings of the 22nd Annual International Symposium on Computer Architecture
, 1995
"... Multiscalar processors use a new, aggressive implementation paradigm for extracting large quantities of instruction level parallelism from ordinary high level language programs. A single program is divided into a collection of tasks by a combination of software and hardware. The tasks are distribute ..."
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Cited by 585 (30 self)
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Multiscalar processors use a new, aggressive implementation paradigm for extracting large quantities of instruction level parallelism from ordinary high level language programs. A single program is divided into a collection of tasks by a combination of software and hardware. The tasks
HMMER web server: interactive sequence similarity searching
- Nucleic Acids Research
, 2011
"... HMMER is a software suite for protein sequence similarity searches using probabilistic methods. Previously, HMMER has mainly been available only as a computationally intensive UNIX command-line tool, restricting its use. Recent advances in the soft-ware, HMMER3, have resulted in a 100-fold speed gai ..."
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Cited by 255 (0 self)
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HMMER is a software suite for protein sequence similarity searches using probabilistic methods. Previously, HMMER has mainly been available only as a computationally intensive UNIX command-line tool, restricting its use. Recent advances in the soft-ware, HMMER3, have resulted in a 100-fold speed
Results 1 - 10
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79,515