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440,144
An Algorithm for Orienting Graphs Based on CauseEffect Pairs and Its Applications to Orienting Protein Networks
"... We consider a graph orientation problem arising in the study of biological networks. Given an undirected graph and a list of ordered sourcetarget pairs, the goal is to orient the graph so that a maximum number of pairs will admit a directed path from the source to the target. We show that the prob ..."
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Cited by 17 (3 self)
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We consider a graph orientation problem arising in the study of biological networks. Given an undirected graph and a list of ordered sourcetarget pairs, the goal is to orient the graph so that a maximum number of pairs will admit a directed path from the source to the target. We show
Factor Graphs and the SumProduct Algorithm
 IEEE TRANSACTIONS ON INFORMATION THEORY
, 1998
"... A factor graph is a bipartite graph that expresses how a "global" function of many variables factors into a product of "local" functions. Factor graphs subsume many other graphical models including Bayesian networks, Markov random fields, and Tanner graphs. Following one simple c ..."
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Cited by 1787 (72 self)
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A factor graph is a bipartite graph that expresses how a "global" function of many variables factors into a product of "local" functions. Factor graphs subsume many other graphical models including Bayesian networks, Markov random fields, and Tanner graphs. Following one simple
Querying objectoriented databases
 ACM SIGMOD INTERNATIONAL CONFERENCE ON MANAGEMENT OF DATA
, 1992
"... We present a novel language for querying objectoriented databases. The language is built around the idea of extended path expressions that substantially generalize [ZAN83], and on an adaptation of the firstorder formalization of objectoriented languages from [KW89, KLW90, KW92]. The language inco ..."
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Cited by 493 (6 self)
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We present a novel language for querying objectoriented databases. The language is built around the idea of extended path expressions that substantially generalize [ZAN83], and on an adaptation of the firstorder formalization of objectoriented languages from [KW89, KLW90, KW92]. The language
Logical foundations of objectoriented and framebased languages
 JOURNAL OF THE ACM
, 1995
"... We propose a novel formalism, called Frame Logic (abbr., Flogic), that accounts in a clean and declarative fashion for most of the structural aspects of objectoriented and framebased languages. These features include object identity, complex objects, inheritance, polymorphic types, query methods, ..."
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Cited by 880 (64 self)
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We propose a novel formalism, called Frame Logic (abbr., Flogic), that accounts in a clean and declarative fashion for most of the structural aspects of objectoriented and framebased languages. These features include object identity, complex objects, inheritance, polymorphic types, query methods
Graphbased algorithms for Boolean function manipulation
 IEEE TRANSACTIONS ON COMPUTERS
, 1986
"... In this paper we present a new data structure for representing Boolean functions and an associated set of manipulation algorithms. Functions are represented by directed, acyclic graphs in a manner similar to the representations introduced by Lee [1] and Akers [2], but with further restrictions on th ..."
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Cited by 3499 (47 self)
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on the ordering of decision variables in the graph. Although a function requires, in the worst case, a graph of size exponential in the number of arguments, many of the functions encountered in typical applications have a more reasonable representation. Our algorithms have time complexity proportional
A Framework for Dynamic Graph Drawing
 CONGRESSUS NUMERANTIUM
, 1992
"... Drawing graphs is an important problem that combines flavors of computational geometry and graph theory. Applications can be found in a variety of areas including circuit layout, network management, software engineering, and graphics. The main contributions of this paper can be summarized as follows ..."
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Cited by 627 (44 self)
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as follows: ffl We devise a model for dynamic graph algorithms, based on performing queries and updates on an implicit representation of the drawing, and we show its applications. ffl We present several efficient dynamic drawing algorithms for trees, seriesparallel digraphs, planar stdigraphs, and planar
Exploiting bounded signal flow for graph orientation based on causeeffect pairs
 In Proceedings of the 1st International ICST Conference on Theory and Practice of Algorithms in (Computer) Systems (TAPAS 2011
"... Background: We consider the following problem: Given an undirected network and a set of sender–receiver pairs, direct all edges such that the maximum number of “signal flows ” defined by the pairs can be routed respecting edge directions. This problem has applications in understanding protein intera ..."
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Cited by 8 (0 self)
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Background: We consider the following problem: Given an undirected network and a set of sender–receiver pairs, direct all edges such that the maximum number of “signal flows ” defined by the pairs can be routed respecting edge directions. This problem has applications in understanding protein
A Metrics Suite for Object Oriented Design
 IEEE Trans. Softw. Eng
, 1994
"... Given the central role that software development plays in the delivery and application of information technology, managers are increasingly focusing on process improvement in the software development area. This demand has spurred the provision of a number of new and/or improved approaches to softwar ..."
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Cited by 1079 (3 self)
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Given the central role that software development plays in the delivery and application of information technology, managers are increasingly focusing on process improvement in the software development area. This demand has spurred the provision of a number of new and/or improved approaches
Community detection in graphs
, 2009
"... The modern science of networks has brought significant advances to our understanding of complex systems. One of the most relevant features of graphs representing real systems is community structure, or clustering, i. e. the organization of vertices in clusters, with many edges joining vertices of th ..."
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Cited by 801 (1 self)
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The modern science of networks has brought significant advances to our understanding of complex systems. One of the most relevant features of graphs representing real systems is community structure, or clustering, i. e. the organization of vertices in clusters, with many edges joining vertices
The program dependence graph and its use in optimization
 ACM Transactions on Programming Languages and Systems
, 1987
"... In this paper we present an intermediate program representation, called the program dependence graph (PDG), that makes explicit both the data and control dependence5 for each operation in a program. Data dependences have been used to represent only the relevant data flow relationships of a program. ..."
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Cited by 989 (3 self)
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In this paper we present an intermediate program representation, called the program dependence graph (PDG), that makes explicit both the data and control dependence5 for each operation in a program. Data dependences have been used to represent only the relevant data flow relationships of a program
Results 1  10
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440,144