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A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood
, 2003
"... The increase in the number of large data sets and the complexity of current probabilistic sequence evolution models necessitates fast and reliable phylogeny reconstruction methods. We describe a new approach, based on the maximumlikelihood principle, which clearly satisfies these requirements. The ..."
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Cited by 2109 (30 self)
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The increase in the number of large data sets and the complexity of current probabilistic sequence evolution models necessitates fast and reliable phylogeny reconstruction methods. We describe a new approach, based on the maximumlikelihood principle, which clearly satisfies these requirements
A Maximum Entropy approach to Natural Language Processing
 COMPUTATIONAL LINGUISTICS
, 1996
"... The concept of maximum entropy can be traced back along multiple threads to Biblical times. Only recently, however, have computers become powerful enough to permit the widescale application of this concept to real world problems in statistical estimation and pattern recognition. In this paper we des ..."
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Cited by 1341 (5 self)
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describe a method for statistical modeling based on maximum entropy. We present a maximumlikelihood approach for automatically constructing maximum entropy models and describe how to implement this approach efficiently, using as examples several problems in natural language processing.
A MaximumEntropyInspired Parser
, 1999
"... We present a new parser for parsing down to Penn treebank style parse trees that achieves 90.1% average precision/recall for sentences of length 40 and less, and 89.5% for sentences of length 100 and less when trained and tested on the previously established [5,9,10,15,17] "stan dard" se ..."
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Cited by 963 (19 self)
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" sections of the Wall Street Journal tree bank. This represents a 13% decrease in error rate over the best singleparser results on this corpus [9]. The major technical innova tion is the use of a "maximumentropyinspired" model for conditioning and smoothing that let us successfully to test
A new approach to the maximum flow problem
 JOURNAL OF THE ACM
, 1988
"... All previously known efficient maximumflow algorithms work by finding augmenting paths, either one path at a time (as in the original Ford and Fulkerson algorithm) or all shortestlength augmenting paths at once (using the layered network approach of Dinic). An alternative method based on the pre ..."
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Cited by 672 (34 self)
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on the preflow concept of Karzanov is introduced. A preflow is like a flow, except that the total amount flowing into a vertex is allowed to exceed the total amount flowing out. The method maintains a preflow in the original network and pushes local flow excess toward the sink along what are estimated
Maximum entropy markov models for information extraction and segmentation
, 2000
"... Hidden Markov models (HMMs) are a powerful probabilistic tool for modeling sequential data, and have been applied with success to many textrelated tasks, such as partofspeech tagging, text segmentation and information extraction. In these cases, the observations are usually modeled as multinomial ..."
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Cited by 554 (18 self)
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, capitalization, formatting, partofspeech), and defines the conditional probability of state sequences given observation sequences. It does this by using the maximum entropy framework to fit a set of exponential models that represent the probability of a state given an observation and the previous state. We
A maximum likelihood approach to continuous speech recognition
 IEEE Trans. Pattern Anal. Machine Intell
, 1983
"... AbstractSpeech recognition is formulated as a problem of maximum likelihood decoding. This formulation requires statistical models of the speech production process. In this paper, we describe a number of statistical models for use in speech recognition. We give special attention to determining the ..."
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Cited by 472 (9 self)
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AbstractSpeech recognition is formulated as a problem of maximum likelihood decoding. This formulation requires statistical models of the speech production process. In this paper, we describe a number of statistical models for use in speech recognition. We give special attention to determining
PAML: a program package for phylogenetic analysis by maximum likelihood
 COMPUT APPL BIOSCI 13:555–556
, 1997
"... PAML, currently in version 1.2, is a package of programs for phylogenetic analyses of DNA and protein sequences using the method of maximum likelihood (ML). The programs can be used for (i) maximum likelihood estimation of evolutionary parameters such as branch lengths in a phylogenetic tree, the tr ..."
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Cited by 1403 (16 self)
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PAML, currently in version 1.2, is a package of programs for phylogenetic analyses of DNA and protein sequences using the method of maximum likelihood (ML). The programs can be used for (i) maximum likelihood estimation of evolutionary parameters such as branch lengths in a phylogenetic tree
A Maximum Entropy Model for PartOfSpeech Tagging
, 1996
"... This paper presents a statistical model which trains from a corpus annotated with PartOfSpeech tags and assigns them to previously unseen text with stateoftheart accuracy(96.6%). The model can be classified as a Maximum Entropy model and simultaneously uses many contextual "features" t ..."
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Cited by 577 (1 self)
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This paper presents a statistical model which trains from a corpus annotated with PartOfSpeech tags and assigns them to previously unseen text with stateoftheart accuracy(96.6%). The model can be classified as a Maximum Entropy model and simultaneously uses many contextual "
Maximum Likelihood Linear Transformations for HMMBased Speech Recognition
 Computer Speech and Language
, 1998
"... This paper examines the application of linear transformations for speaker and environmental adaptation in an HMMbased speech recognition system. In particular, transformations that are trained in a maximum likelihood sense on adaptation data are investigated. Other than in the form of a simple bias ..."
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Cited by 538 (65 self)
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This paper examines the application of linear transformations for speaker and environmental adaptation in an HMMbased speech recognition system. In particular, transformations that are trained in a maximum likelihood sense on adaptation data are investigated. Other than in the form of a simple
MEGA5: Molecular evolutionary genetics analysis using maximum . . .
, 2011
"... Comparative analysis of molecular sequence data is essential for reconstructing the evolutionary histories of species and inferring the nature and extent of selective forces shaping the evolution of genes and species. Here, we announce the release of Molecular Evolutionary Genetics Analysis version ..."
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Cited by 6858 (19 self)
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5 (MEGA5), which is a userfriendly software for mining online databases, building sequence alignments and phylogenetic trees, and using methods of evolutionary bioinformatics in basic biology, biomedicine, and evolution. The newest addition in MEGA5 is a collection of maximum likelihood (ML
Results 1  10
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