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doi:10.1093/nar/gki085 5 0 SAGE: 5 0-end Serial Analysis of Gene Expression database
, 2004
"... To comprehensively identify transcription start sites and the frequencies of individual mRNAs in human cell libraries, a method of 5 0 end Serial Analysis of Gene Expression (SAGE) was developed recently, which makes it possible to collect a large amount of start site information, and subsequently, ..."
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To comprehensively identify transcription start sites and the frequencies of individual mRNAs in human cell libraries, a method of 5 0 end Serial Analysis of Gene Expression (SAGE) was developed recently, which makes it possible to collect a large amount of start site information, and subsequently
A Public Database for Gene Expression in Human Cancers
, 2002
"... A public database, SAGEmap, was created as a component of the Cancer Genome Anatomy Project to provide a central location for depositing, retrieving, and analyzing human gene expression data. This database uses serial analysis of gene expression to quantify transcript levels in both malignant and no ..."
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Cited by 50 (4 self)
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A public database, SAGEmap, was created as a component of the Cancer Genome Anatomy Project to provide a central location for depositing, retrieving, and analyzing human gene expression data. This database uses serial analysis of gene expression to quantify transcript levels in both malignant
Transcriptional profile of rat extraocular muscle by serial analysis of gene expression. Invest Ophthalmol Vis Sci 43
, 2002
"... PURPOSE. Although extraocular muscle (EOM) is skeletal muscle, aspects of its biology are unlike other striated muscle. In this study, the broad molecular genetics profile underlying the novel EOM phenotype was examined. METHODS. Serial analysis of gene expression (SAGE) was used to quantify adult r ..."
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Cited by 19 (6 self)
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PURPOSE. Although extraocular muscle (EOM) is skeletal muscle, aspects of its biology are unlike other striated muscle. In this study, the broad molecular genetics profile underlying the novel EOM phenotype was examined. METHODS. Serial analysis of gene expression (SAGE) was used to quantify adult
Serial Analysis of Gene Expression in Mouse Uterus at the
"... Although oligonucleotide chips, cDNA microarrays, differential display reverse transcription-PCR, and other approaches have been used to screen implantation-related molecules, the mechanism by which embryo implantation occurs is still unknown. The aim of this study was to profile the differential ge ..."
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gene expression between inter-implantation site and implantation site in mouse uterus on day 5 of pregnancy by serial analysis of gene expression (SAGE). In our two SAGE libraries of 11-bp tags, the total numbers of tags sequenced were 48,121 for the interimplantation site and 50
Effects of dihydrotestosterone on adipose tissue measured by serial analysis of gene expression
- J Mol Endocrinol
, 2004
"... Intra-abdominal fat accumulation is related to several diseases, especially diabetes and heart disease. Molecular mechanisms associated with this independent risk factor are not well established. Through the serial analysis of gene expression (SAGE) strategy, we have studied the transcriptomic effec ..."
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Cited by 7 (1 self)
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Intra-abdominal fat accumulation is related to several diseases, especially diabetes and heart disease. Molecular mechanisms associated with this independent risk factor are not well established. Through the serial analysis of gene expression (SAGE) strategy, we have studied the transcriptomic
Differential Gene Expression Analysis in the Dermatophyte
"... Although Trichophyton rubrum is the dermatophyte more commonly found in lesions of human skin and nails [1], its genetic and biological aspects are still poorly understood. In order to better understand gene expression in this pathogen, we used the SAGE (Serial Analysis of Gene Expression) technique ..."
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Although Trichophyton rubrum is the dermatophyte more commonly found in lesions of human skin and nails [1], its genetic and biological aspects are still poorly understood. In order to better understand gene expression in this pathogen, we used the SAGE (Serial Analysis of Gene Expression
The Arabidopsis Root Transcriptome by Serial Analysis of Gene Expression. Gene Identification Using the
"... Large-scale identification of genes expressed in roots of the model plant Arabidopsis was performed by serial analysis of gene expression (SAGE), on a total of 144,083 sequenced tags, representing at least 15,964 different mRNAs. For tag to gene assignment, we developed a computational approach base ..."
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Large-scale identification of genes expressed in roots of the model plant Arabidopsis was performed by serial analysis of gene expression (SAGE), on a total of 144,083 sequenced tags, representing at least 15,964 different mRNAs. For tag to gene assignment, we developed a computational approach
Research Article Application of Serial Analysis of Gene Expression to the Study of the Gene Expression Profile of
"... Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. This study describes the application of the LongSAGE methodology to study the gene expression profile in promastigotes of Leishmania infantum chagasi. A ta ..."
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Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. This study describes the application of the LongSAGE methodology to study the gene expression profile in promastigotes of Leishmania infantum chagasi. A
Serial Analysis of Gene Expression in the Corneal Endothelium of Fuchs ’ Dystrophy
, 300
"... PURPOSE. To compare the gene expression profiles of normal human corneal endothelium with Fuchs ’ corneal endothelium, by using serial analysis of gene expression (SAGE). METHODS. Three pairs of normal human corneas were obtained from eye banks. Thirteen bisected Fuchs ’ corneal buttons were process ..."
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Cited by 5 (0 self)
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PURPOSE. To compare the gene expression profiles of normal human corneal endothelium with Fuchs ’ corneal endothelium, by using serial analysis of gene expression (SAGE). METHODS. Three pairs of normal human corneas were obtained from eye banks. Thirteen bisected Fuchs ’ corneal buttons were
A comprehensive SAGE database for the analysis of cd T cells
"... cd T cells have been conserved since the adaptive immune system arose, yet their importance is still unclear. In an attempt to compensate for the lack of a broad knowledge base of cd T cells across species, global analyses of cd T cell transcriptomes have been performed using serial analysis of gene ..."
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confirm previous studies that suggested that global gene expression in cd and ab T cells is quite similar; however, a 5-fold increase in cd T cell-specific transcripts could be induced by Con A/IL2 stimulation. These new public databases provide additional resources for the annotation/analysis of global
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