Results 1 - 10 of 226,314

An Algebra for Protein Structure Data

by Yanchao Wang, Rajshekhar Sunderraman
"... Abstract—This paper presents an algebraic approach to optimize queries in domain-specific database management system for protein structure data. The approach involves the introduction of several protein structure specific algebraic operators to query the complex data stored in an object-oriented dat ..."
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Abstract—This paper presents an algebraic approach to optimize queries in domain-specific database management system for protein structure data. The approach involves the introduction of several protein structure specific algebraic operators to query the complex data stored in an object

Mining Protein Structure Data

by José Santos, Pedro Barahona
"... Abstract. This paper describes the application of machine learning algorithms to the discovery of knowledge in a protein structure database. The problem addressed is the determination of the solvent exposure of each amino acid residue, using different levels of exposed surface to define exposure. Fi ..."
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Abstract. This paper describes the application of machine learning algorithms to the discovery of knowledge in a protein structure database. The problem addressed is the determination of the solvent exposure of each amino acid residue, using different levels of exposed surface to define exposure

The Protein Data Bank

by Helen M. Berman, John Westbrook, Zukang Feng, Gary Gilliland, T. N. Bhat, Helge Weissig, Ilya N. Shindyalov, Philip E. Bourne - Nucleic Acids Res , 2000
"... The Protein Data Bank (PDB; http://www.rcsb.org/pdb/ ) is the single worldwide archive of structural data of biological macromolecules. This paper describes the goals of the PDB, the systems in place for data deposition and access, how to obtain further information, and near-term plans for the futur ..."
Abstract - Cited by 1387 (24 self) - Add to MetaCart
The Protein Data Bank (PDB; http://www.rcsb.org/pdb/ ) is the single worldwide archive of structural data of biological macromolecules. This paper describes the goals of the PDB, the systems in place for data deposition and access, how to obtain further information, and near-term plans

SCOP: a structural classification of proteins database for the investigation of sequences and structures.

by Tim J P Hubbard , Bart Ailey , Steven E Brenner , Alexey G Murzin , Cyrus Chothia - J. Mol. Biol. , 1995
"... ABSTRACT The Structural Classification of Proteins (SCOP) database provides a detailed and comprehensive description of the relationships of all known proteins structures. The classification is on hierarchical levels: the first two levels, family and superfamily, describe near and far evolutionary ..."
Abstract - Cited by 1552 (24 self) - Add to MetaCart
ABSTRACT The Structural Classification of Proteins (SCOP) database provides a detailed and comprehensive description of the relationships of all known proteins structures. The classification is on hierarchical levels: the first two levels, family and superfamily, describe near and far evolutionary

A protein structure data and analysis system,” unpublished

by Hao Tian, Rajshekhar Sunderraman, Irene Weber, Haibin Wang, Hong Yang
"... Abstract — In this paper, we present the design and implementation of a protein structure data and analysis system that is only used in the lab for analyzing the proprietary data. It is capable of storing public protein data, such as the data in Protein Data Bank (PDB) [1], and life scientists ’ pro ..."
Abstract - Cited by 1 (1 self) - Add to MetaCart
Abstract — In this paper, we present the design and implementation of a protein structure data and analysis system that is only used in the lab for analyzing the proprietary data. It is capable of storing public protein data, such as the data in Protein Data Bank (PDB) [1], and life scientists

Querying Semi-Structured Data

by Serge Abiteboul , 1997
"... ..."
Abstract - Cited by 530 (18 self) - Add to MetaCart
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Protein Secondary Structure Prediction . . .

by David T. Jones - JO MOL B/O/. (1999) 292, 195-202 .GG , 1999
"... ..."
Abstract - Cited by 945 (19 self) - Add to MetaCart
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The quadtree and related hierarchical data structures

by Hanan Samet - ACM Computing Surveys , 1984
"... A tutorial survey is presented of the quadtree and related hierarchical data structures. They are based on the principle of recursive decomposition. The emphasis is on the representation of data used in applications in image processing, computer graphics, geographic information systems, and robotics ..."
Abstract - Cited by 541 (12 self) - Add to MetaCart
A tutorial survey is presented of the quadtree and related hierarchical data structures. They are based on the principle of recursive decomposition. The emphasis is on the representation of data used in applications in image processing, computer graphics, geographic information systems

. PROTEIN STRUCTURE DATA MANAGEMENT SYSTEM

by Yanchao Wang, Yanchao Wang
"... by ..."
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The SWISS-PROT protein sequence data bank and its supplement TrEMBL in 1999

by Amos Bairoch, Rolf Apweiler - Nucleic Acids Res , 1999
"... SWISS-PROT is a curated protein sequence database which strives to provide a high level of annotation (such as the description of the function of a protein, its domain structure, post-translational modifications, variants, etc.), a minimal level of redundancy and high level of integration with other ..."
Abstract - Cited by 624 (5 self) - Add to MetaCart
SWISS-PROT is a curated protein sequence database which strives to provide a high level of annotation (such as the description of the function of a protein, its domain structure, post-translational modifications, variants, etc.), a minimal level of redundancy and high level of integration
Results 1 - 10 of 226,314