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PLATCOM: Current Status and Plan for the Next Stages
BibTeX
@MISC{Choi_platcom:current,
author = {Kwangmin Choi and Jeong-hyeon Choi and Sun Kim},
title = {PLATCOM: Current Status and Plan for the Next Stages},
year = {}
}
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Abstract
We have been developing a system for comparing multiple genomes, PLATCOM, where users can choose genomes of their choice freely and perform analysis of the selected genomes with a suite of computational tools. PLATCOM is built on internal databases such as GenBank, COG, KEGG, and Pairwise Comparison Database (PCDB) that contains all pairwise comparisons (97,034 entries) of protein sequence files (.faa) and whole genome sequence files (.fna) of 312 replicons. PCDB is designed to incorporate new genomes automatically, so that PLAT-COM can evolve as new genomes become available. PLATCOM is available at
