Algorithmic complexity of protein identification: Combinatorics of weighted strings (2004)


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by Mark Cieliebak , Thomas Eriebach , Zsuzsanna Liptak , Jens Stoye , Emo Welzl
Citations:4 - 1 self

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Vishnu Patankar – unknown authors - 2005
10 Protein identification by mass spectrometry: issues to be considered – Michael A. Baldwin - 2004
Publication No._____________ – Aleksey Alfred Nakorchevskiy, David W. Hoffman, Jennifer S. Brodbelt, Mia K. Markey, Aleksey Alfred Nakorchevskiy, Aleksey Alfred Nakorchevskiy, Ph. D
19 On De Novo Interpretation of Tandem Mass Spectra for Peptide Identification – Vineet Bafna, Nathan Edwards - 2003
4 Generating Peptide Candidates from Amino-Acid Sequence Databases for Protein Identification via Mass Spectrometry – Nathan Edwards, Ross Lippert, Nathan Edwards - 2002
Research Changes in the Proteome Associated with the Action of Bcr-Abl Tyrosine Kinase Are Not Related to Transcriptional Regulation* – Anthony D. Whetton - 2002
Research Differential Proteomic Analysis of the Mouse Retina THE INDUCTION OF CRYSTALLIN PROTEINS BY RETINAL DEGENERATION IN THE rd1 MOUSE* – unknown authors
The Journal of Experimental Medicine CORRESPONDENCE – Jason Devoss, Yafei Hou, Kellsey Johannes, Wen Lu, Gregory I. Liou, John Rinn, Howard Chang, Rachel Caspi, Lawrence Fong, Mark S. Anderson, Mark Anderson
3 Advances and challenges in liquid chromatography-mass spectrometry-based proteomics profiling for clinical applications – Wei-jun Qian, Jon M. Jacobs, Tao Liu, David G. Camp Ii, Richard D. Smith - 2006
Commentary re: Protemics-based Identification of RS/DJ-1 as a Novel Circulating Tumor Antigen – Antigenic Marker, Ryuji Kobayashi
Sequence optimization as an alternative . . . – Alejandro Heredia-Langner , et al. - 2004
unknown title – Ro Heredia-langner, William R. Cannon, Kenneth D. Jarman, Kristin H. Jarman
20 Efficiency of database search for identification of mutated and modified proteins via mass spectrometry – Pavel A. Pevzner, Zufar Mulyukov, Vlado Dancik, Chris L Tang - 2001
Exploiting the kernel trick to . . . – Yan Fu, et al. - 2004
unknown title – Yan Fu, Qiang Yang, Ruixiang Sun, Dequan Li, Rong Zeng, Charles X. Ling, Wen Gao - 2004
unknown title – Yan Fu, Qiang Yang, Ruixiang Sun, Dequan Li, Rong Zeng, Charles X. Ling, Wen Gao
5 Constrained De Novo Peptide Identification via Multi-objective Optimization – J.M. Malard, A. Heredia-Langner, D.J. Baxter, K.H. Jarman, W.R. Cannon - 2004
Research A Heuristic Method for Assigning a False-discovery Rate for Protein Identifications from Mascot Database Search Results* – D. Brent Weatherly, James A. Atwood Iii, Todd A. Minning, Cameron Cavola, Rick L. Tarleton, Ron Orl
Spectral Dictionaries FIG. 1. Two approaches to peptide – unknown authors