PatternHunter: faster and more sensitive homology search (2002)

by Bin Ma , John Tromp , Ming Li
Venue:BIOINFORMATICS
Citations:201 - 20 self

Active Bibliography

52 On Spaced Seeds for Similarity Search – Uri Keich, Ming Li, Bin Ma, John Tromp - 2002
Cover Sheet For Proposal To The National Science Foundation – Nsf Proposal Number
13 Optimized Seamless Integration of Biomolecular Data – Barbara A. Eckman, Zoé Lacroix, Louiqa Raschid, Swedeland Rd Uw - 2001
4 Fast Optimal Genome Tiling with Applications to Microarray Design and Homology Search – Piotr Berman, Paul Bertone, Bhaskar Dasgupta, Mark Gerstein, Ming-yang Kao, Michael Snyder - 2003
Clustering of Database Sequences for Fast Homology Search Using Upper Bounds on Alignment Score – Masumi Itoh, Tatsuya Akutsu, Minoru Kanehisa
Basics of Molecular Biology – Martin Tompa - 2003
4 The Suffix Sequoia Index for Approximate String Matching – Ela Hunt - 2003
1 Noise Models in Gene Array Analysis – Ron Dror - 2001
Genome Archaeology: A review of genome duplication – Daniel G. Brown - 2004
The Gene Resource Locator: Integrated Annotation of the Draft – Human Genome, Toshihiko Honkura Jun Ogasawara, Tomoyuki Yamada Shinichi Morishita
12 Methods for inferring block-wise ancestral history from haploid sequences: The haplotype coloring problem – Russell Schwartz, Andrew G. Clark, Sorin Istrail - 2002
12 Computing the Minimum Recombinant Haplotype Configuration from incomplete genotype data on a pedigree by integer linear programming – Jing Li, Tao Jiang - 2005
17 Intelligen: A distributed workflow system for discovering protein-protein interactions – Krys Kochut, Jonathan Arnold, Amit Sheth, Au Pls - 2003
21 Practical algorithms and fixed-parameter tractability for the single individual SNP haplotyping problem – Romeo Rizzi, Vineet Bafna, Sorin Istrail
5 The Statistical Significance of Max-Gap Clusters – Rose Hoberman, David Sankoff, Dannie Durand
Review Article Chemical Approaches for Structure and Function of RNA in Postgenomic Era – Tae Suk Ro-choi, Yong Chun Choi
unknown title – Zehua Chen, Thomas D. Schneider - 2005
An Interactive Search Technique for String Databases – Tamer Kahveci , Ambuj K. Singh - 2003
BAC Overlap Identification Based on Bit-Vectors – Jens-uwe Krause, Jürgen Kleffe