Haplotyping as Perfect Phylogeny: Conceptual Framework and Efficient Solutions (Extended Abstract) (2002)

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by Dan Gusfield
Citations:95 - 10 self

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21 An Overview of Combinatorial Methods for Haplotype Inference – Dan Gusfield - 2004
1 Populations – Yufeng Wu, Yufeng Wu
DISCRETE ALGORITHMS FOR ANALYSIS OF GENOTYPE DATA – Dumitru Brinza - 2007
28 A survey of computational methods for determining haplotypes – Bjarni V. Halldórsson, Vineet Bafna, Nathan Edwards, Shibu Yooseph, Sorin Istrail - 2004
8 Combinatorial problems arising in SNP and Haplotype Analysis – Bjarni V. Halldórsson, Vineet Bafna, Nathan Edwards, Shibu Yooseph, Sorin Istrail - 2003
11 Linear Reduction for Haplotype Inference – Jingwu He, Alex Zelikovsky - 2004
56 Efficient reconstruction of haplotype structure via perfect phylogeny – Eleazar Eskin, Eran Halperin, Richard M. Karp - 2003
5 Haplotype inference by pure parsimony via genetic algorithm – Rui-sheng Wang, Xiang-sun Zhang Li Sheng - 1997
22 The Haplotyping Problem: An Overview of Computational Models and Solutions – Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Jing Li, Gianluca Della, Vedova Riccardo, Dondi Jing Li - 2003
19 A note on efficient computation of haplotypes via perfect phylogeny – Vineet Bafna, Dan Gusfield, Sridhar Hannenhalli, Shibu Yooseph - 2004
An Application of Integer Linear Programming to the Haplotype Inference by Pure Parsimony Problem – Ian M. Harrower, Ian M. Harrower
Influence of Tree Topology Restrictions on the Complexity of Haplotyping with Missing Data – Michael Elberfeld, Ilka Schnoor, Till Tantau - 2008
Solving haplotyping inference parsimony problem using a new basic polynomial formulation – Paola Bertolazzi, Alessandra Godi, Martine Labbé, Leonardo Tininini - 2006
24 An approximation algorithm for haplotype inference by maximum parsimony – Yao-ting Huang, Kun-mao Chao, Kun-mao Chao, Ting Chen, Ting Chen - 2005
25 Perfect phylogeny and haplotype assignment – Eran Halperin, Richard M. Karp - 2004
12 Improved recombination lower bounds for haplotype data – Vineet Bafna, Vikas Bansal - 2005
2 On the Complexity of SNP Block Partitioning Under the Perfect Phylogeny Model – Jens Gramm, Tzvika Hartman, Till Nierhoff, Roded Sharan, Till Tantau
Large Scale Recovery of Haplotypes from Genotype Data – Using Imperfect Phylogeny, Eran Halperin, Eleazar Eskin, Eran Halperin, Eleazar Eskin - 2002
The Block Partitioning Results Using Different � and � a – Kui Zhang, Zhaohui S. Qin, Jun S. Liu, Ting Chen, Michael S. Waterman, Fengzhu Sun, Email Alerting, Tag Snps - 2004