Haplotyping as Perfect Phylogeny: Conceptual Framework and Efficient Solutions (Extended Abstract) (2002)

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by Dan Gusfield
Citations:109 - 10 self

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23 An Overview of Combinatorial Methods for Haplotype Inference – Dan Gusfield - 2004
1 Populations – Yufeng Wu, Yufeng Wu
DISCRETE ALGORITHMS FOR ANALYSIS OF GENOTYPE DATA – Dumitru Brinza - 2007
11 Combinatorial problems arising in SNP and Haplotype Analysis – Bjarni V. Halldórsson, Vineet Bafna, Nathan Edwards, Shibu Yooseph, Sorin Istrail - 2003
33 A survey of computational methods for determining haplotypes – Bjarni V. Halldórsson, Vineet Bafna, Nathan Edwards, Shibu Yooseph, Sorin Istrail - 2004
12 Linear Reduction for Haplotype Inference – Jingwu He, Alex Zelikovsky - 2004
68 Efficient reconstruction of haplotype structure via perfect phylogeny – Eleazar Eskin, Eran Halperin, Richard M. Karp - 2003
1 Haplotype Inference – Dan Gusþeld, Steven Hecht Orzack
49 Model-based inference of haplotype block variation – Gideon Greenspan, Dan Geiger - 2003
5 Haplotype inference by pure parsimony via genetic algorithm – Rui-sheng Wang, Xiang-sun Zhang Li Sheng - 1997
44 Y: Haplotype inference by maximum parsimony – Lusheng Wang, Ying Xu
26 The Haplotyping Problem: An Overview of Computational Models and Solutions – Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Jing Li, Gianluca Della, Vedova Riccardo, Dondi Jing Li - 2003
23 A note on efficient computation of haplotypes via perfect phylogeny – Vineet Bafna, Dan Gusfield, Sridhar Hannenhalli, Shibu Yooseph - 2004
An Application of Integer Linear Programming to the Haplotype Inference by Pure Parsimony Problem – Ian M. Harrower, Ian M. Harrower
Influence of Tree Topology Restrictions on the Complexity of Haplotyping with Missing Data – Michael Elberfeld, Ilka Schnoor, Till Tantau - 2008
2 Solving haplotyping inference parsimony problem using a new basic polynomial formulation – Paola Bertolazzi, Alessandra Godi, Martine Labbé, Leonardo Tininini - 2006
28 An approximation algorithm for haplotype inference by maximum parsimony – Yao-ting Huang, Kun-mao Chao, Kun-mao Chao, Ting Chen, Ting Chen - 2005
29 Perfect phylogeny and haplotype assignment – Eran Halperin, Richard M. Karp - 2004
Improved Approach for Haplotype Inference Based on Markov Chain ∗ – Ling-yun Wu, Ji-hong Zhang Raymond Chan - 2008