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...esentation of neuronal morphological is a virtually and geometrically feature captured by the cylindrical-based description can be measured statistically and analyzed quickly, reliably, and precisely =-=[19]-=-. This digitally neuron raw data have been stored in different format in several published databases for easy sharing and allowing for visualizing and capturing purposes. There are three (3) popular d...

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...pments are only focus on ability to generate accurate network models wit properties that closely match the 3D neuronal morphology and connectivity of different brain regions. Still, in neuroConstruct =-=[8]-=- envisioned in its extensions will allow greater biological realism. Only in late 1990, one development [21] had applied volume rendering techniques with shading to reconstruct and visualize a 3D volu...

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...eported next to the branches in the picture), a type of distinguish basal (T), Cartesion positions (X,Y,Z in micrometers), radius (R), and end-point connection (C, presenting the label of the parent) =-=[2,12,23]-=- as per stated in Figure 2, refer to the right panel. As shown in Figure 2, each tracing point is represented as a row of seven numbers [2,12,23] that describes the properties of a single compartment,...

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...3D neuronal morphology and connectivity of different brain regions. Still, in neuroConstruct [8] envisioned in its extensions will allow greater biological realism. Only in late 1990, one development =-=[21]-=- had applied volume rendering techniques with shading to reconstruct and visualize a 3D volumetric model of a dendritic. The shading helps accentuate the 3D shape of the dendrite but can represent the...

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...esented as compartments), make up the entire neuron shapes. These varieties of neuron shapes attain through a development process called of elongation and branching of axonal and dendrites extensions =-=[1,2,3,4]-=-. Such digital reconstruction files are efficient and allow extensive morphometric analysis to be produced from implementation of biophysical virtual neuron models as allowing ‘pseudo-3D’ rendering an...

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...ed formats to describe neuron morphology which are ‘SWC’, ‘Neurolucida’ and ‘Eutectic’ format. Even though it is provided in a different format, it is still used in the basic structure of neuron data =-=[2]-=-. These files can range from 500 lines for small and simple cell to 10,000 or more lines for large and complex cells. In this purpose, ‘SWC’ format will be applied and details explanation about its ba...

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...etrics and Bioinformatics (IJBB), Volume (4): Issue (2) 54Norhasana Razzali, Mohd Shafry Mohd Rahim, Rosely Kumoi, Daut Daman FIGURE 1: Sample cell of neuronal morphology used as data for this study =-=[11]-=-. ‘SWC’ format is for describing the structure of neuron in the simplest way and has been designed to emphasis on compactness and uses the minimum amount of information and number of fields to fully d...

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...esented as compartments), make up the entire neuron shapes. These varieties of neuron shapes attain through a development process called of elongation and branching of axonal and dendrites extensions =-=[1,2,3,4]-=-. Such digital reconstruction files are efficient and allow extensive morphometric analysis to be produced from implementation of biophysical virtual neuron models as allowing ‘pseudo-3D’ rendering an...

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... the structure of neuron in the simplest way and has been designed to emphasis on compactness and uses the minimum amount of information and number of fields to fully describe the branching structure =-=[17]-=-. Basically in ‘SWC’ format, each neuron dendritic segments is represented by an identification number (ID, the number reported next to the branches in the picture), a type of distinguish basal (T), C...

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...urons against another digital files database and format such as ‘Neurolucida’ for assisting the comparison analysis. Conclusion Neuroanatomy is leading the pack of success stories in neuroinformatics =-=[20]-=-. An important aims in computational anatomy at the single-cell level consists of creating algorithms to generate virtual neuron structures that are morphologically corresponding to real neuronal dend...

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...r neuroanatomy. Recently, neuron morphology data has been gathered and published in digital databases offering variety of dendritic structure. One of the famous databases is known as Duke Southampton =-=[23]-=-. However, the approach that is applied in this database presents static image of neuron. As such, there is a certain situation where neuron structure is unable to be extracted in details because of n...