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316
A fast and high quality multilevel scheme for partitioning irregular graphs
 SIAM JOURNAL ON SCIENTIFIC COMPUTING
, 1998
"... Recently, a number of researchers have investigated a class of graph partitioning algorithms that reduce the size of the graph by collapsing vertices and edges, partition the smaller graph, and then uncoarsen it to construct a partition for the original graph [Bui and Jones, Proc. ..."
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Cited by 795 (12 self)
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Recently, a number of researchers have investigated a class of graph partitioning algorithms that reduce the size of the graph by collapsing vertices and edges, partition the smaller graph, and then uncoarsen it to construct a partition for the original graph [Bui and Jones, Proc.
Faster ShortestPath Algorithms for Planar Graphs
 STOC 94
, 1994
"... We give a lineartime algorithm for singlesource shortest paths in planar graphs with nonnegative edgelengths. Our algorithm also yields a lineartime algorithm for maximum flow in a planar graph with the source and sink on the same face. The previous best algorithms for these problems required\O ..."
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Cited by 161 (13 self)
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We give a lineartime algorithm for singlesource shortest paths in planar graphs with nonnegative edgelengths. Our algorithm also yields a lineartime algorithm for maximum flow in a planar graph with the source and sink on the same face. The previous best algorithms for these problems required\Omega\Gamma n p log n) time where n is the number of nodes in the input graph. For the case where negative edgelengths are allowed, we give an algorithm requiring O(n 4=3 log nL) time, where L is the absolute value of the most negative length. Previous algorithms for shortest paths with negative edgelengths required \Omega\Gamma n 3=2 ) time. Our shortestpath algorithm yields an O(n 4=3 log n)time algorithm for finding a perfect matching in a planar bipartite graph. A similar improvement is obtained for maximum flow in a directed planar graph.
Spectral Partitioning Works: Planar graphs and finite element meshes
 In IEEE Symposium on Foundations of Computer Science
, 1996
"... Spectral partitioning methods use the Fiedler vectorthe eigenvector of the secondsmallest eigenvalue of the Laplacian matrixto find a small separator of a graph. These methods are important components of many scientific numerical algorithms and have been demonstrated by experiment to work extr ..."
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Cited by 144 (8 self)
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Spectral partitioning methods use the Fiedler vectorthe eigenvector of the secondsmallest eigenvalue of the Laplacian matrixto find a small separator of a graph. These methods are important components of many scientific numerical algorithms and have been demonstrated by experiment to work extremely well. In this paper, we show that spectral partitioning methods work well on boundeddegree planar graphs and finite element meshes the classes of graphs to which they are usually applied. While naive spectral bisection does not necessarily work, we prove that spectral partitioning techniques can be used to produce separators whose ratio of vertices removed to edges cut is O( p n) for boundeddegree planar graphs and twodimensional meshes and O i n 1=d j for wellshaped ddimensional meshes. The heart of our analysis is an upper bound on the secondsmallest eigenvalues of the Laplacian matrices of these graphs. 1. Introduction Spectral partitioning has become one of the mos...
Approximation Algorithms for Disjoint Paths Problems
, 1996
"... The construction of disjoint paths in a network is a basic issue in combinatorial optimization: given a network, and specified pairs of nodes in it, we are interested in finding disjoint paths between as many of these pairs as possible. This leads to a variety of classical NPcomplete problems for w ..."
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Cited by 139 (0 self)
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The construction of disjoint paths in a network is a basic issue in combinatorial optimization: given a network, and specified pairs of nodes in it, we are interested in finding disjoint paths between as many of these pairs as possible. This leads to a variety of classical NPcomplete problems for which very little is known from the point of view of approximation algorithms. It has recently been brought into focus in work on problems such as VLSI layout and routing in highspeed networks; in these settings, the current lack of understanding of the disjoint paths problem is often an obstacle to the design of practical heuristics.
Highly scalable parallel algorithms for sparse matrix factorization
 IEEE Transactions on Parallel and Distributed Systems
, 1994
"... In this paper, we describe a scalable parallel algorithm for sparse matrix factorization, analyze their performance and scalability, and present experimental results for up to 1024 processors on a Cray T3D parallel computer. Through our analysis and experimental results, we demonstrate that our algo ..."
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Cited by 117 (29 self)
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In this paper, we describe a scalable parallel algorithm for sparse matrix factorization, analyze their performance and scalability, and present experimental results for up to 1024 processors on a Cray T3D parallel computer. Through our analysis and experimental results, we demonstrate that our algorithm substantially improves the state of the art in parallel direct solution of sparse linear systems—both in terms of scalability and overall performance. It is a well known fact that dense matrix factorization scales well and can be implemented efficiently on parallel computers. In this paper, we present the first algorithm to factor a wide class of sparse matrices (including those arising from two and threedimensional finite element problems) that is asymptotically as scalable as dense matrix factorization algorithms on a variety of parallel architectures. Our algorithm incurs less communication overhead and is more scalable than any previously known parallel formulation of sparse matrix factorization. Although, in this paper, we discuss Cholesky factorization of symmetric positive definite matrices, the algorithms can be adapted for solving sparse linear least squares problems and for Gaussian elimination of diagonally dominant matrices that are almost symmetric in structure. An implementation of our sparse Cholesky factorization algorithm delivers up to 20 GFlops on a Cray T3D for mediumsize structural engineering and linear programming problems. To the best of our knowledge,
Geometric Mesh Partitioning: Implementation and Experiments
"... We investigate a method of dividing an irregular mesh into equalsized pieces with few interconnecting edges. The method’s novel feature is that it exploits the geometric coordinates of the mesh vertices. It is based on theoretical work of Miller, Teng, Thurston, and Vavasis, who showed that certain ..."
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Cited by 102 (19 self)
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We investigate a method of dividing an irregular mesh into equalsized pieces with few interconnecting edges. The method’s novel feature is that it exploits the geometric coordinates of the mesh vertices. It is based on theoretical work of Miller, Teng, Thurston, and Vavasis, who showed that certain classes of “wellshaped” finite element meshes have good separators. The geometric method is quite simple to implement: we describe a Matlab code for it in some detail. The method is also quite efficient and effective: we compare it with some other methods, including spectral bisection.
A separator theorem for graphs with an excluded minor and its applications
 IN PROCEEDINGS OF THE 22ND ANNUAL ACM SYMPOSIUM ON THEORY OF COMPUTING
, 1990
"... Let G be an nvertex graph with nonnegative weights whose sum is 1 assigned to its vertices, and with no minor isomorphic to a given hvertex graph H. We prove that there is a set X of no more than h 3/2 n 1/2 vertices of G whose deletion creates a graph in which the total weight of every connected ..."
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Cited by 95 (1 self)
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Let G be an nvertex graph with nonnegative weights whose sum is 1 assigned to its vertices, and with no minor isomorphic to a given hvertex graph H. We prove that there is a set X of no more than h 3/2 n 1/2 vertices of G whose deletion creates a graph in which the total weight of every connected component is at most 1/2. This extends significantly a wellknown theorem of Lipton and Tarjan for planar graphs. We exhibit an algorithm which finds, given an nvertex graph G with weights as above and an hvertex graph H, either such a set X or a minor of G isomorphic to H. The algorithm runs in time O(h 1/2 n 1/2 m), where m is the number of edges of G plus the number of its vertices. Our results supply extensions of the many known applications of the LiptonTarjan separator theorem from the class of planar graphs (or that of graphs with bounded genus) to any class of graphs with an excluded minor. For example, it follows that for any fixed graph H, given a graph G with n vertices and with no Hminor one can approximate the size of the maximum independent set of G up to a relative error of 1 / √ log n in polynomial time, find that size exactly and find the chromatic number of G in time 2 O( √ n) and solve any sparse system of n linear equations in n unknowns whose sparsity structure 0 corresponds to G in time O(n 3/2). We also describe a combinatorial application of our result which relates the treewidth of a graph to the maximum size of a Khminor in it.
Accelerated training of conditional random fields with stochastic gradient methods
 In ICML
, 2006
"... We apply Stochastic MetaDescent (SMD), a stochastic gradient optimization method with gain vector adaptation, to the training of Conditional Random Fields (CRFs). On several large data sets, the resulting optimizer converges to the same quality of solution over an order of magnitude faster than lim ..."
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Cited by 95 (4 self)
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We apply Stochastic MetaDescent (SMD), a stochastic gradient optimization method with gain vector adaptation, to the training of Conditional Random Fields (CRFs). On several large data sets, the resulting optimizer converges to the same quality of solution over an order of magnitude faster than limitedmemory BFGS, the leading method reported to date. We report results for both exact and inexact inference techniques. 1.
Analysis of multilevel graph partitioning
, 1995
"... Recently, a number of researchers have investigated a class of algorithms that are based on multilevel graph partitioning that have moderate computational complexity, and provide excellent graph partitions. However, there exists little theoretical analysis that could explain the ability of multileve ..."
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Cited by 92 (13 self)
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Recently, a number of researchers have investigated a class of algorithms that are based on multilevel graph partitioning that have moderate computational complexity, and provide excellent graph partitions. However, there exists little theoretical analysis that could explain the ability of multilevel algorithms to produce good partitions. In this paper we present such an analysis. We show under certain reasonable assumptions that even if no refinement is used in the uncoarsening phase, a good bisection of the coarser graph is worse than a good bisection of the finer graph by at most a small factor. We also show that the size of a good vertexseparator of the coarse graph projected to the finer graph (without performing refinement in the uncoarsening phase) is higher than the size of a good vertexseparator of the finer graph by at most a small factor.