A training algorithm that maximizes the margin between the training patterns and the decision boundary is presented. The technique is applicable to a wide variety of classifiaction functions, including Perceptrons, polynomials, and Radial Basis Functions. The effective number of parameters is adjusted automatically to match the complexity of the problem. The solution is expressed as a linear combination of supporting patterns. These are the subset of training patterns that are closest to the decision boundary. Bounds on the generalization performance based on the leave-one-out method and the VC-dimension are given. Experimental results on optical character recognition problems demonstrate the good generalization obtained when compared with other learning algorithms.

In the feature subset selection problem, a learning algorithm is faced with the problem of selecting a relevant subset of features upon which to focus its attention, while ignoring the rest. To achieve the best possible performance with a particular learning algorithm on a particular training set, a feature subset selection method should consider how the algorithm and the training set interact. We explore the relation between optimal feature subset selection and relevance. Our wrapper method searches for an optimal feature subset tailored to a particular algorithm and a domain. We study the strengths and weaknesses of the wrapper approach and show a series of improved designs. We compare the wrapper approach to induction without feature subset selection and to Relief, a filter approach to feature subset selection. Significant improvement in accuracy is achieved for some datasets for the two families of induction algorithms used: decision trees and

We present a tree-structured architecture for supervised learning. The statistical model underlying the architecture is a hi-erarchical mixture model in which both the mixture coefficients and the mixture components are generalized linear models (GLIM’s). Learning is treated as a max-imum likelihood problem; in particular, we present an Expectation-Maximization (EM) algorithm for adjusting the parame-ters of the architecture. We also develop an on-line learning algorithm in which the pa-rameters are updated incrementally. Com-parative simulation results are presented in the robot dynamics domain. 1

Methods for voting classification algorithms, such as Bagging and AdaBoost, have been shown to be very successful in improving the accuracy of certain classifiers for artificial and real-world datasets. We review these algorithms and describe a large empirical study comparing several variants in conjunction with a decision tree inducer (three variants) and a Naive-Bayes inducer. The purpose of the study is to improve our understanding of why and when these algorithms, which use perturbation, reweighting, and combination techniques, affect classification error. We provide a bias and variance decomposition of the error to show how different methods and variants influence these two terms. This allowed us to determine that Bagging reduced variance of unstable methods, while boosting methods (AdaBoost and Arc-x4) reduced both the bias and variance of unstable methods but increased the variance for Naive-Bayes, which was very stable. We observed that Arc-x4 behaves differently than AdaBoost if reweighting is used instead of resampling, indicating a fundamental difference. Voting variants, some of which are introduced in this paper, include: pruning versus no pruning, use of probabilistic estimates, weight perturbations (Wagging), and backfitting of data. We found that Bagging improves when probabilistic estimates in conjunction with no-pruning are used, as well as when the data was backfit. We measure tree sizes and show an interesting positive correlation between the increase in the average tree size in AdaBoost trials and its success in reducing the error. We compare the mean-squared error of voting methods to non-voting methods and show that the voting methods lead to large and significant reductions in the mean-squared errors. Practical problems that arise in implementing boosting algorithms are explored, including numerical instabilities and underflows. We use scatterplots that graphically show how AdaBoost reweights instances, emphasizing not only "hard" areas but also outliers and noise.

Hidden.Markov Models (HMMs) are applied t.0 the problems of statistical modeling, database searching and multiple sequence alignment of protein families and protein domains. These methods are demonstrated the on globin family, the protein kinase catalytic domain, and the EF-hand calcium binding motif. In each case the parameters of an HMM are estimated from a training set of unaligned sequences. After the HMM is built, it is used to obtain a multiple alignment of all the training sequences. It is also used to search the. SWISS-PROT 22 database for other sequences. that are members of the given protein family, or contain the given domain. The Hi " produces multiple alignments of good quality that agree closely with the alignments produced by programs that incorporate threedimensional structural information. When employed in discrimination tests (by examining how closely the sequences in a database fit the globin, kinase and EF-hand HMMs), the '\ HMM is able to distinguish members of these families from non-members with a high degree of accuracy. Both the HMM and PROFILESEARCH (a technique used to search for relationships between a protein sequence and multiply aligned sequences) perform better in these tests than PROSITE (a dictionary of sites and patterns in proteins). The HMM appecvs to have a slight advantage over PROFILESEARCH in terms of lower rates of false

We show that it is possible to extend hidden Markov models to have a countably infinite number of hidden states. By using the theory of Dirichlet processes we can implicitly integrate out the infinitely many transition parameters, leaving only three hyperparameters which can be learned from data. These three hyperparameters define a hierarchical Dirichlet process capable of capturing a rich set of transition dynamics. The three hyperparameters control the time scale of the dynamics, the sparsity of the underlying state-transition matrix, and the expected number of distinct hidden states in a finite sequence. In this framework it is also natural to allow the alphabet of emitted symbols to be infinite---consider, for example, symbols being possible words appearing in English text.

Learning of continuous valued functions using neural network ensembles (committees) can give improved accuracy, reliable estimation of the generalization error, and active learning. The ambiguity is defined as the variation of the output of ensemble members averaged over unlabeled data, so it quantifies the disagreement among the networks. It is discussed how to use the ambiguity in combination with cross-validation to give a reliable estimate of the ensemble generalization error, and how this type of ensemble cross-validation can sometimes improve performance. It is shown how to estimate the optimal weights of the ensemble members using unlabeled data. By a generalization of query by committee, it is finally shown how the ambiguity can be used to select new training data to be labeled in an active learning scheme. 1 INTRODUCTION It is well known that a combination of many different predictors can improve predictions. In the neural networks community "ensembles" of neural networks h...

This paper provides an introduction to support vector machines (SVMs), kernel Fisher discriminant analysis, and

We had previously shown that regularization principles lead to approximation schemes which are equivalent to networks with one layer of hidden units, called Regularization Networks. In particular, standard smoothness functionals lead to a subclass of regularization networks, the well known Radial Basis Functions approximation schemes. This paper shows that regularization networks encompass a much broader range of approximation schemes, including many of the popular general additive models and some of the neural networks. In particular, we introduce new classes of smoothness functionals that lead to different classes of basis functions. Additive splines as well as some tensor product splines can be obtained from appropriate classes of smoothness functionals. Furthermore, the same generalization that extends Radial Basis Functions (RBF) to Hyper Basis Functions (HBF) also leads from additive models to ridge approximation models, containing as special cases Breiman's hinge functions, som...

This paper is a multidisciplinary review of empirical, statistical learning from a graphical model perspective. Well-known examples of graphical models include Bayesian networks, directed graphs representing a Markov chain, and undirected networks representing a Markov field. These graphical models are extended to model data analysis and empirical learning using the notation of plates. Graphical operations for simplifying and manipulating a problem are provided including decomposition, differentiation, and the manipulation of probability models from the exponential family. Two standard algorithm schemas for learning are reviewed in a graphical framework: Gibbs sampling and the expectation maximization algorithm. Using these operations and schemas, some popular algorithms can be synthesized from their graphical specification. This includes versions of linear regression, techniques for feed-forward networks, and learning Gaussian and discrete Bayesian networks from data. The paper conclu...