Abstract. We present a novel method for generic visual categorization: the problem of identifying the object content of natural images while generalizing across variations inherent to the object class. This bag of keypoints method is based on vector quantization of affine invariant descriptors of image patches. We propose and compare two alternative implementations using different classifiers: Naïve Bayes and SVM. The main advantages of the method are that it is simple, computationally efficient and intrinsically invariant. We present results for simultaneously classifying seven semantic visual categories. These results clearly demonstrate that the method is robust to background clutter and produces good categorization accuracy even without exploiting geometric information. 1.

We describe the application of kernel methods to Natural Language Processing (NLP) problems. In many NLP tasks the objects being modeled are strings, trees, graphs or other discrete structures which require some mechanism to convert them into feature vectors. We describe kernels for various natural language structures, allowing rich, high dimensional representations of these structures. We show how a kernel over trees can be applied to parsing using the voted perceptron algorithm, and we give experimental results on the ATIS corpus of parse trees.

This paper introduces new learning algorithms for natural language processing based on the perceptron algorithm. We show how the algorithms can be efficiently applied to exponential sized representations of parse trees, such as the "all subtrees" (DOP) representation described by (Bod 98), or a representation tracking all sub-fragments of a tagged sentence. We give experimental results showing significant improvements on two tasks: parsing Wall Street Journal text, and named-entity extraction from web data.

We extend previous work on tree kernels to estimate the similarity between the dependency trees of sentences. Using this kernel within a Support Vector Machine, we detect and classify relations between entities in the Automatic Content Extraction (ACE) corpus of news articles. We examine the utility of different features such as Wordnet hypernyms, parts of speech, and entity types, and find that the dependency tree kernel achieves a 20 % F1 improvement over a “bag-of-words ” kernel. 1

We present an application of kernel methods to extracting relations from unstructured natural language sources.

We introduce a class of string kernels, called mismatch kernels, for use with support vector machines (SVMs) in a discriminative approach to the protein classification problem. These kernels measure sequence similarity based on shared occurrences of k-length subsequences, counted with up to m mismatches, and do not rely on any generative model for the positive training sequences. We compute the kernels efficiently using a mismatch tree data structure and report experiments on a benchmark SCOP dataset, where we show that the mismatch kernel used with an SVM classifier performs as well as the Fisher kernel, the most successful method for remote homology detection, while achieving considerable computational savings.

Wahba's classical representer theorem states that the solutions of certain risk minimization problems involving an empirical risk term and a quadratic regularizer can be written as expansions in terms of the training examples. We generalize the theorem to a larger class of regularizers and empirical risk terms, and give a self-contained proof utilizing the feature space associated with a kernel. The result shows that a wide range of problems have optimal solutions that live in the finite dimensional span of the training examples mapped into feature space, thus enabling us to carry out kernel algorithms independent of the (potentially infinite) dimensionality of the feature space.

A new kernel function between two labeled graphs is presented. Feature vectors are defined as the counts of label paths produced by random walks on graphs. The kernel computation finally boils down to obtaining the stationary state of a discrete-time linear system, thus is efficiently performed by solving simultaneous linear equations. Our kernel is based on an infinite dimensional feature space, so it is fundamentally different from other string or tree kernels based on dynamic programming. We will present promising empirical results in classification of chemical compounds. 1 1.

Motivation Classification of proteins sequences into functional and structural families based on sequence homology is a central problem in computational biology. Discriminative supervised machine learning approaches provide good performance, but simplicity and computational efficiency of training and prediction are also important concerns. Results We introduce a class of string kernels, called mismatch kernels, for use with support vector machines (SVMs) in a discriminative approach to the problem of protein classification and remote homology detection. These kernels measure sequence similarity based on shared occurrences of fixed-length patterns in the data, allowing for mutations between patterns. Thus the kernels provide a biologically well-motivated way to compare protein sequences without relying on family-based generative models such as hidden Markov models. We compute the kernels efficiently using a mismatch tree data structure, allowing us to calculate the contributions of all patterns occurring in the data in one pass while traversing the tree. When used with an SVM, the kernels enable fast prediction on test sequences. We report experiments on two benchmark SCOP data sets, where we show that the mismatch kernel used with an SVM classifier performs competitively with state-of-the-art methods for homology detection, particularly when very few training examples are available. Examination of the highestweighted patterns learned by the SVM classifier recovers biologically important motifs in protein families and superfamilies. Availability SVM software is publically available at

Kernel methods in general and support vector machines in particular have been successful in various learning tasks on data represented in a single table. Much 'real-world ' data, however, is structured- it has no natural representation in a single table. Usually, to apply kernel methods to 'realworld' data, extensive pre-processing is performed toembed the data into areal vector space and thus in a single table. This survey describes several approaches ofdefining positive definite kernels on structured instances directly.