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72
Proof verification and hardness of approximation problems
 IN PROC. 33RD ANN. IEEE SYMP. ON FOUND. OF COMP. SCI
, 1992
"... We show that every language in NP has a probablistic verifier that checks membership proofs for it using logarithmic number of random bits and by examining a constant number of bits in the proof. If a string is in the language, then there exists a proof such that the verifier accepts with probabilit ..."
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Cited by 754 (38 self)
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We show that every language in NP has a probablistic verifier that checks membership proofs for it using logarithmic number of random bits and by examining a constant number of bits in the proof. If a string is in the language, then there exists a proof such that the verifier accepts with probability 1 (i.e., for every choice of its random string). For strings not in the language, the verifier rejects every provided “proof " with probability at least 1/2. Our result builds upon and improves a recent result of Arora and Safra [6] whose verifiers examine a nonconstant number of bits in the proof (though this number is a very slowly growing function of the input length). As a consequence we prove that no MAX SNPhard problem has a polynomial time approximation scheme, unless NP=P. The class MAX SNP was defined by Papadimitriou and Yannakakis [82] and hard problems for this class include vertex cover, maximum satisfiability, maximum cut, metric TSP, Steiner trees and shortest superstring. We also improve upon the clique hardness results of Feige, Goldwasser, Lovász, Safra and Szegedy [42], and Arora and Safra [6] and shows that there exists a positive ɛ such that approximating the maximum clique size in an Nvertex graph to within a factor of N ɛ is NPhard.
The NPcompleteness column: an ongoing guide
 JOURNAL OF ALGORITHMS
, 1987
"... This is the nineteenth edition of a (usually) quarterly column that covers new developments in the theory of NPcompleteness. The presentation is modeled on that used by M. R. Garey and myself in our book "Computers and Intractability: A Guide to the Theory of NPCompleteness," W. H. Freem ..."
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Cited by 218 (0 self)
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This is the nineteenth edition of a (usually) quarterly column that covers new developments in the theory of NPcompleteness. The presentation is modeled on that used by M. R. Garey and myself in our book "Computers and Intractability: A Guide to the Theory of NPCompleteness," W. H. Freeman & Co., New York, 1979 (hereinafter referred to as "[G&J]"; previous columns will be referred to by their dates). A background equivalent to that provided by [G&J] is assumed, and, when appropriate, crossreferences will be given to that book and the list of problems (NPcomplete and harder) presented there. Readers who have results they would like mentioned (NPhardness, PSPACEhardness, polynomialtimesolvability, etc.) or open problems they would like publicized, should
Hardness Of Approximations
, 1996
"... This chapter is a selfcontained survey of recent results about the hardness of approximating NPhard optimization problems. ..."
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Cited by 113 (4 self)
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This chapter is a selfcontained survey of recent results about the hardness of approximating NPhard optimization problems.
The Traveling Salesman Problem and Its Variations
, 2002
"... Introduction The Maximum Traveling Salesman Problem (MAX TSP), also known informally as the "taxicab ripoff problem", is stated as follows: Given an n \Theta n real matrix c = (c ij ), called a weight matrix, find a hamiltonian cycle i 1 7! i 2 7! : : : 7! i n 7! i 1 , for which the maxi ..."
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Cited by 110 (4 self)
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Introduction The Maximum Traveling Salesman Problem (MAX TSP), also known informally as the "taxicab ripoff problem", is stated as follows: Given an n \Theta n real matrix c = (c ij ), called a weight matrix, find a hamiltonian cycle i 1 7! i 2 7! : : : 7! i n 7! i 1 , for which the maximum value of c i 1 i 2 + c i 2 i 3 + : : : + c i n\Gamma1 i n + c i n i 1 is attained. Here (i 1 ; : : : ; i n ) is a permutation of the set f1; : : : ; ng. Of course, in this general setting, the Maximum Traveling Salesman Problem is equivalent to the Minimum Traveling Salesman Problem, Partially supported by NSF Grant DMS 9734138 since the maximum weight hamiltonian cycle with the weight matrix c corresponds to the minimum weight hamiltonian cycle with the weight matrix \Gammac. What makes the MAX TSP special is that there are some interesting and natural special cases of weights c ij , not preserved by the sign reversal, where much more can be said about the problem than in the general case. Be
The Hardness Of Approximation: Gap Location
 Computational Complexity
, 1994
"... . We refine the complexity analysis of approximation problems by relating it to a new parameter called gap location. Many of the results obtained so far for approximations yield satisfactory analysis with respect to this refined parameter, but some known results (e.g., max kcolorability, max 3dim ..."
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Cited by 80 (0 self)
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. We refine the complexity analysis of approximation problems by relating it to a new parameter called gap location. Many of the results obtained so far for approximations yield satisfactory analysis with respect to this refined parameter, but some known results (e.g., max kcolorability, max 3dimensional matching and max notallequal 3sat) fall short of doing so. As a second contribution, our work fills the gap in these cases by presenting new reductions. Next, we present definitions and hardness results of new approximation versions of some NPcomplete optimization problems. The problems we treat are vertex cover (for which we define a different optimization problem from the one treated in Papadimitriou & Yannakakis 1991), kedge coloring, and set splitting.
Efficient Checking of Polynomials and Proofs and the Hardness of Approximation Problems
, 1992
"... The definition of the class NP [Coo71, Lev73] highlights the problem of verification of proofs as one of central interest to theoretical computer science. Recent efforts have shown that the efficiency of the verification can be greatly improved by allowing the verifier access to random bits and acce ..."
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Cited by 68 (9 self)
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The definition of the class NP [Coo71, Lev73] highlights the problem of verification of proofs as one of central interest to theoretical computer science. Recent efforts have shown that the efficiency of the verification can be greatly improved by allowing the verifier access to random bits and accepting probabilistic guarantees from the verifier [BFL91, BFLS91, FGL + 91, AS92]. We improve upon the efficiency of the proof systems developed above and obtain proofs which can be verified probabilistically by examining only a constant number of (randomly chosen) bits of the proof. The efficiently verifiable proofs constructed here rely on the structural properties of lowdegree polynomials. We explore the properties of these functions by examining some simple and basic questions about them. We consider questions of the form: • (testing) Given an oracle for a function f, is f close to a lowdegree polynomial? • (correcting) Let f be close to a lowdegree polynomial g, is it possible to efficiently reconstruct the value of g on any given input using an oracle for f? 2 The questions described above have been raised before in the context of coding theory as the problems of errordetecting and errorcorrecting of codes. More recently
Perspectives of Monge Properties in Optimization
, 1995
"... An m × n matrix C is called Monge matrix if c ij + c rs c is + c rj for all 1 i ! r m, 1 j ! s n. In this paper we present a survey on Monge matrices and related Monge properties and their role in combinatorial optimization. Specifically, we deal with the following three main topics: (i) f ..."
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Cited by 56 (3 self)
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An m &times; n matrix C is called Monge matrix if c ij + c rs c is + c rj for all 1 i ! r m, 1 j ! s n. In this paper we present a survey on Monge matrices and related Monge properties and their role in combinatorial optimization. Specifically, we deal with the following three main topics: (i) fundamental combinatorial properties of Monge structures, (ii) applications of Monge properties to optimization problems and (iii) recognition of Monge properties.
Approximation Algorithms for Asymmetric TSP by Decomposing Directed Regular Multigraphs
, 2006
"... A directed multigraph is said to be dregular if the indegree and outdegree of every vertexis exactly d. By Hall's theorem one can represent such a multigraph as a combination of atmost n2 cycle covers each taken with an appropriate multiplicity. We prove that if the dregular multigraph does ..."
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Cited by 56 (1 self)
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A directed multigraph is said to be dregular if the indegree and outdegree of every vertexis exactly d. By Hall's theorem one can represent such a multigraph as a combination of atmost n2 cycle covers each taken with an appropriate multiplicity. We prove that if the dregular multigraph does not contain more than b d/2c copies of any 2cycle then we can find asimilar decomposition into n2 pairs of cycle covers where each 2cycle occurs in at most onecomponent of each pair. Our proof is constructive and gives a polynomial algorithm to find such a decomposition. Since our applications only need one such a pair of cycle covers whoseweight is at least the average weight of all pairs, we also give an alternative, simpler algorithm to extract a single such pair.This combinatorial theorem then comes handy in rounding a fractional solution of an LP relaxation of the maximum Traveling Salesman Problem (TSP) problem. The first stage of therounding procedure obtains 2cycle covers that do not share a 2cycle with weight at least twice the weight of the optimal solution. Then we show how to extract a tour from the 2 cycle covers,whose weight is at least 2 /3 of the weight of the longest tour. This improves upon the previous5/8 approximation with a simpler algorithm. Utilizing a reduction from maximum TSP to the shortest superstring problem we obtain a 2.5approximation algorithm for the latter problemwhich is again much simpler than the previous one. For minimum asymmetric TSP the same technique gives 2cycle covers, not sharing a 2cycle, with weight at most twice the weight of the optimum. Assuming triangle inequality, we then show how to obtain from this pair of cycle covers a tour whose weight is at most0.842 log2 n larger than optimal. This improves upon a previous approximation algorithm with approximation guarantee of 0.999 log2 n. Other applications of the rounding procedure are approximation algorithms for maximum 3cycle cover (factor 2/3, previously 3/5) and maximum
Molecular Computing
"... We design a molecular Turing machine and determine the complexity of the problems solvable by molecular computers. In [A94], a combinatorial molecular experiment to solve the NPcomplete problem of Hamiltonian Path was proposed and implemented. Using our design, we show that such molecular computers ..."
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Cited by 53 (0 self)
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We design a molecular Turing machine and determine the complexity of the problems solvable by molecular computers. In [A94], a combinatorial molecular experiment to solve the NPcomplete problem of Hamiltonian Path was proposed and implemented. Using our design, we show that such molecular computers can in fact compute PSPACE, under the generous assumptions implicit in [A94]. Under stronger and somewhat more practical restrictions, which [A94] fails to satisfy, we show that molecular computers are limited to solving problems in P. 1 Introduction Molecular and quantum computers have recently been considered as alternatives to standard models such as Turing machines, PRAM's, or logical circuits [S94, Si94, A94, B94]. Shor has shown that quantum computers can factor large numbers and calculate discrete logarithms in polynomial time, even though no known polynomialtime algorithm is known [S94]. Adleman has proposed a molecular "computer" that solves the NPcomplete Hamiltonian Path proble...
Combinatorial algorithms for DNA sequence assembly
 Algorithmica
, 1993
"... The trend towards very large DNA sequencing projects, such as those being undertaken as part of the human genome initiative, necessitates the development of efficient and precise algorithms for assembling a long DNA sequence from the fragments obtained by shotgun sequencing or other methods. The seq ..."
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Cited by 53 (3 self)
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The trend towards very large DNA sequencing projects, such as those being undertaken as part of the human genome initiative, necessitates the development of efficient and precise algorithms for assembling a long DNA sequence from the fragments obtained by shotgun sequencing or other methods. The sequence reconstruction problem that we take as our formulation of DNA sequence assembly is a variation of the shortest common superstring problem, complicated by the presence of sequencing errors and reverse complements of fragments. Since the simpler superstring problem is NPhard, any efficient reconstruction procedure must resort to heuristics. In this paper, however, a four phase approach based on rigorous design criteria is presented, and has been found to be very accurate in practice. Our method is robust in the sense that it can accommodate high sequencing error rates and list a series of alternate solutions in the event that several appear equally good. Moreover it uses a limited form ...