We address the problem of image segmentation with statistical shape priors in the context of the level set framework. Our paper makes two contributions: Firstly, we propose to generate invariance of the shape prior to certain transformations by intrinsic registration of the evolving level set function. In contrast to existing approaches to invariance in the level set framework, this closed-form solution removes the need to iteratively optimize explicit pose parameters. Moreover, we will argue that the resulting shape gradient is more accurate in that it takes into account the e#ect of boundary variation on the object's pose.

Abstract. Since their introduction as a means of front propagation and their first application to edge-based segmentation in the early 90’s, level set methods have become increasingly popular as a general framework for image segmentation. In this paper, we present a survey of a specific class of region-based level set segmentation methods and clarify how they can all be derived from a common statistical framework. Region-based segmentation schemes aim at partitioning the image domain by progressively fitting statistical models to the intensity, color, texture or motion in each of a set of regions. In contrast to edge-based schemes such as the classical Snakes, region-based methods tend to be less sensitive to noise. For typical images, the respective cost functionals tend to have less local minima which makes them particularly well-suited for local optimization methods such as the level set method. We detail a general statistical formulation for level set segmentation. Subsequently, we clarify how the integration of various low level criteria leads to a set of cost functionals and point out relations between the different segmentation schemes. In experimental results, we demonstrate how the level set function is driven to partition the image plane into domains of coherent color, texture, dynamic texture or motion. Moreover, the Bayesian formulation allows to introduce prior shape knowledge into the level set method. We briefly review a number of advances in this domain.

Abstract. All previous geometric active contour models that have been formulated as gradient flows of various energies use the same L 2-type inner product to define the notion of gradient. Recent work has shown that this inner product induces a pathological Riemannian metric on the space of smooth curves. However, there are also undesirable features associated with the gradient flows that this inner product induces. In this paper, we reformulate the generic geometric active contour model by redefining the notion of gradient in accordance with Sobolev-type inner products. We call the resulting flows Sobolev active contours. Sobolev metrics induce favorable regularity properties in their gradient flows. In addition, Sobolev active contours favor global translations, but are not restricted to such motions; they are also less susceptible to certain types of local minima in contrast to traditional active contours. These properties are particularly useful in tracking applications. We demonstrate the general methodology by reformulating some standard edge-based and regionbased active contour models as Sobolev active contours and show the substantial improvements gained in segmentation.

We study the question of integrating prior shape knowledge into level set based segmentation methods. In particular, we investigate dissimilarity measures for shapes encoded by the signed distance function.

Figure 1: Geodesic interpolation and extrapolation. The blue input poses of the elephant are geodesically interpolated in an as-isometricas-possible fashion (shown in green), and the resulting path is geodesically continued (shown in purple) to naturally extend the sequence. No semantic information, segmentation, or knowledge of articulated components is used. We present a novel framework to treat shapes in the setting of Riemannian geometry. Shapes – triangular meshes or more generally straight line graphs in Euclidean space – are treated as points in a shape space. We introduce useful Riemannian metrics in this space to aid the user in design and modeling tasks, especially to explore the space of (approximately) isometric deformations of a given shape. Much of the work relies on an efficient algorithm to compute geodesics in shape spaces; to this end, we present a multiresolution framework to solve the interpolation problem – which amounts to solving a boundary value problem – as well as the extrapolation problem – an initial value problem – in shape space. Based on these two operations, several classical concepts like parallel transport and the exponential map can be used in shape space to solve various geometric modeling and geometry processing tasks. Applications include shape morphing, shape deformation, deformation transfer, and intuitive shape exploration.

We propose a variational framework for the integration multiple competing shape priors into level set based segmentation schemes.

Abstract. We address the problem of the segmentation of cerebral white matter structures from diffusion tensor images. Our approach is grounded on the theoretically well-founded differential geometrical properties of the space of multivariate normal distributions. We introduce a variational formulation, in the level set framework, to estimate the optimal segmentation according to the following hypothesis: Diffusion tensors exhibit a Gaussian distribution in the different partitions. Moreover, we must respect the geometric constraints imposed by the interfaces existing among the cerebral structures and detected by the gradient of the diffusion tensor image. We validate our algorithm on synthetic data and report interesting results on real datasets. We focus on two structures of the white matter with different properties and respectively known as the corpus callosum and the corticospinal tract. 1

We develop a new framework for the quantitative analysis of shapes of planar curves. Shapes are modeled on elastic strings that can be bent, stretched or compressed at different rates along the curve. Shapes are treated as elements of a space obtained as the quotient of an infinite-dimensional Riemannian manifold of elastic curves by the action of a reparameterization group. The Riemannian metric encodes the elastic properties of the string and has the property that reparameterizations act by isometries. Geodesics in shape space are used to quantify shape dissimilarities, interpolate and extrapolate shapes, and align shapes according to their elastic properties. The shape spaces and metrics constructed offer a novel environment for the study of shape statistics and for the investigation and simulation of shape dynamics. 1.

Geometric flows are ubiquitous in mesh processing. Curve and surface evolutions based on functional minimization have been used in the context of surface diffusion, denoising, shape optimization, minimal surfaces, and geodesic paths to mention a few. Such gradient flows are nearly always, yet often implicitly, based on the canonical L 2 inner product of vector fields. In this paper, we point out that changing this inner product provides a simple, powerful, and untapped approach to extend current flows. We demonstrate the value of such a norm alteration for regularization and volume-preservation purposes and in the context of shape matching, where deformation priors (ranging from rigid motion to articulated motion) can be incorporated into a gradient flow to drastically improve results. Implementation details, including a differentiable approximation of the Hausdorff distance between irregular meshes, are presented.

This paper tackles an important aspect of the variational problem underlying active contours: optimization by gradient flows. Classically, the definition of a gradient depends directly on the choice of an inner product structure. This consideration is largely absent from the active contours literature. Most authors, explicitely or implicitely, assume that the space of admissible deformations is ruled by the canonical L 2 inner product. The classical gradient flows reported in the literature are relative to this particular choice. Here, we investigate the relevance of using (i) other inner products, yielding other gradient descents, and (ii) other minimizing flows not deriving from any inner product. In particular, we show how to induce different degrees of spatial consistency into the minimizing flow, in order to decrease the probability of getting trapped into irrelevant local minima. We report numerical experiments indicating that the sensitivity of the active contours method to initial conditions, which seriously limits its applicability and efficiency, is alleviated by our application-specific spatially coherent minimizing flows. We show that the choice of the inner product can be seen as a prior on the deformation fields and we present an extension of the definition of the gradient toward more general priors. 1.