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12
Expanding Self-organizing Map for Data Visualization and Cluster Analysis
- Information Sciences
, 2002
"... The Self-Organizing Map (SOM) is a powerful tool in the exploratory phase of data mining. It is capable of projecting high-dimensional data onto a regular, usually 2-dimensional grid of neurons with good neighborhood preservation between two spaces. However, due to the dimensional conflict, the neig ..."
Abstract
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Cited by 6 (6 self)
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The Self-Organizing Map (SOM) is a powerful tool in the exploratory phase of data mining. It is capable of projecting high-dimensional data onto a regular, usually 2-dimensional grid of neurons with good neighborhood preservation between two spaces. However, due to the dimensional conflict, the neighborhood preservation cannot always lead to perfect topology preservation. In this paper, we establish an Expanding SOM (ESOM) to preserve better topology between the two spaces. Besides the neighborhood relationship, our ESOM can detect and preserve an ordering relationship using an expanding mechanism. The computation complexity of the ESOM is comparable with that of the SOM. Our experiment results demonstrate that the ESOM constructs better mappings than the classic SOM, especially, in terms of the topological error. Furthermore, clustering results generated by the ESOM are more accurate than those obtained by the SOM.
Magnification control in self-organizing maps and neural gas
- Neural Computation
, 2006
"... We consider different ways to control the magnification in self-organizing maps (SOM) and neural gas (NG). Starting from early approaches of magnification control in vector quantization, we then concentrate on different approaches for SOM and NG. We show that three structurally similar approaches ca ..."
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Cited by 5 (4 self)
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We consider different ways to control the magnification in self-organizing maps (SOM) and neural gas (NG). Starting from early approaches of magnification control in vector quantization, we then concentrate on different approaches for SOM and NG. We show that three structurally similar approaches can be applied to both algorithms: localized learning, concave-convex learning, and winner relaxing learning. Thereby, the approach of concave-convex learning in SOM is extended to a more general description, whereas the concave-convex learning for NG is new. In general, the control mechanisms generate only slightly different behavior comparing both neural algorithms. However, we emphasize that the NG results are valid for any data dimension, whereas in the SOM case the results hold only for the one-dimensional case. 1
Mathematical Aspects of Neural Networks
- European Symposium of Artificial Neural Networks 2003
, 2003
"... In this tutorial paper about mathematical aspects of neural networks, we will focus on two directions: on the one hand, we will motivate standard mathematical questions and well studied theory of classical neural models used in machine learning. On the other hand, we collect some recent theoretic ..."
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Cited by 5 (4 self)
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In this tutorial paper about mathematical aspects of neural networks, we will focus on two directions: on the one hand, we will motivate standard mathematical questions and well studied theory of classical neural models used in machine learning. On the other hand, we collect some recent theoretical results (as of beginning of 2003) in the respective areas. Thereby, we follow the dichotomy offered by the overall network structure and restrict ourselves to feedforward networks, recurrent networks, and self-organizing neural systems, respectively.
Mobile Robot Local Navigation with a Polar Neural Map
, 1998
"... B Biographical Sketch .................................135 viii List of Tables Table 1 Algorithm for path construction. .......................41 Table 2 Algorithm for determining the next movement direction. . . . . ....41 Table 3 Computational complexity of the system. . . ...............99 ..."
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Cited by 3 (3 self)
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B Biographical Sketch .................................135 viii List of Tables Table 1 Algorithm for path construction. .......................41 Table 2 Algorithm for determining the next movement direction. . . . . ....41 Table 3 Computational complexity of the system. . . ...............99 ix List of Figures Figure 1 Several mobile robots of the class we consider in the thesis. .... 9 Figure 2 The concept of a neural map. . .......................20 Figure 3 Self-organization at the neural mapping (9) level. More neurons are assigned to the `important' areas of X. The mapping is shown by superimposing the neural field F on the signal space X. . . . . . 24 Figure 4 The basic nonlinear processing unit or neuron. . . ...........25 Figure 5 The architecture of the subsystem for path planning with neural maps. ...................................... 31 Figure 6 Different network topologies and connections for 2-dimensional uniform coverage. . ..............................32 Figure 7 Connection weight as a function of distance. . . . ...........33 Figure 8 The nonlinear activation function. . . . ...................35 Figure 9 The target and obstacle configurations (left) and the contours of the equilibrium surface (right). . . . . ...................38 Figure 10 Network equilibrium state of a 50 50 neural map for a single target. ......................................39 Figure 11 The target and obstacle configurations (left) and the contours of the equilibrium surface (right). . . . . ...................39 Figure 12 Network equilibrium state of a 50 50 neural map for multiple targets. ......................................40 Figure 13 Update rasters on a 2-dimensional lattice. . ...............46 Fi...
A Self-Organizing Map with Expanding Force for Data Clustering and Visualization
- In: Proc. of ICDM’02
, 2002
"... The Self-Organizing Map (SOM) is a powerful tool in the exploratory phase of data mining. However, due to the dimensional conflict, the neighborhood preservation cannot always lead to perfect topology preservation. In this paper, we establish an Expanding SOM (ESOM) to detect and preserve better top ..."
Abstract
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Cited by 3 (2 self)
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The Self-Organizing Map (SOM) is a powerful tool in the exploratory phase of data mining. However, due to the dimensional conflict, the neighborhood preservation cannot always lead to perfect topology preservation. In this paper, we establish an Expanding SOM (ESOM) to detect and preserve better topology correspondence between the two spaces. Our experiment results demonstrate that the ESOM constructs better mappings than the classic SOM in terms of both the topological and the quantization errors. Furthermore, clustering results generated by the ESOM are more accurate than those by the SOM.
Auto-SOM: Recursive Parameter Estimation for Guidance of Self-Organizing Feature Maps
, 2001
"... this article we present the Auto-SOM: a method for automatic parameter estimation in the SOM based on estimation by a linear Kalman #lter extended by a recursive parameter estimation method. We demonstrate its effectiveness on examples including a real application problem, and compare its performanc ..."
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Cited by 3 (0 self)
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this article we present the Auto-SOM: a method for automatic parameter estimation in the SOM based on estimation by a linear Kalman #lter extended by a recursive parameter estimation method. We demonstrate its effectiveness on examples including a real application problem, and compare its performance with alternative versions of the SOM and with the GTM.
Second-Order Learning in Self-Organizing Maps
- In Kohonen Maps. Pages 293–302. Elsevier Science
, 1999
"... Introduction The clever handling of control parameters plays an essential role in most learning algorithms. Manipulating the parameters in a convenient way not only may speed up the learning procedure itself but often is responsible for the success of the learning as such. In many learning procedur ..."
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Cited by 2 (0 self)
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Introduction The clever handling of control parameters plays an essential role in most learning algorithms. Manipulating the parameters in a convenient way not only may speed up the learning procedure itself but often is responsible for the success of the learning as such. In many learning procedures of practical interest finding the correct learning parameters or cooling strategies is done by trial and error. In a few cases, strong theorems are known which formulate the parameter strategy in an explicit way an example being the Robins-Monroe theorem for the case of stochastic gradient descent. Other examples may be found in [13]. Since these theorems refer to the asymptotic time behavior they are of limited value for practical applications. There an initial learning period is often decisive on whether a meaningful solution is approached during the convergence phase or not. For this reason a variety of empirical parameter-learning procedures has been invented. The self-learning of th
Special Issue
"... Self-organizing maps (SOMs) are widely used in several fields of application, from neurobiology to multivariate data analysis. In that context, this paper presents variants of the classic SOM algorithm. With respect to the traditional SOM, the modifications regard the core of the algorithm, (the lea ..."
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Self-organizing maps (SOMs) are widely used in several fields of application, from neurobiology to multivariate data analysis. In that context, this paper presents variants of the classic SOM algorithm. With respect to the traditional SOM, the modifications regard the core of the algorithm, (the learning rule), but do not alter the two main tasks it performs, i.e. vector quantization combined with topology preservation. After an intuitive justification based on geometrical considerations, three new rules are defined in addition to the original one. They develop interesting properties such as recursive neighborhood adaptation and non-radial neighborhood adaptation. In order to assess the relative performances and speeds of convergence, the four rules are used to train several maps and the results are compared according to several error measures (quantization error and topology preservation criterions). q 2002 Elsevier Science Ltd. All rights reserved.
Topological Correlation
"... Quantifying the success of the topographic preservation achieved with a neural map is difficult. In this paper we present Topological Correlation, Tc , a method that assesses the degree of topographic preservation achieved based on the linear correlation between the topological distances in the neur ..."
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Quantifying the success of the topographic preservation achieved with a neural map is difficult. In this paper we present Topological Correlation, Tc , a method that assesses the degree of topographic preservation achieved based on the linear correlation between the topological distances in the neural map, and the topological distances in the induced Delaunay triangulation of the network nodes. In contrast to previous indices, Tc has been explicitly devised to assess the topographic preservation within neural maps composed of many sub-graph structures.
Under consideration for publication in Knowledge and Information Systems Evolving Trees for the Retrieval of
, 2008
"... Abstract. In this paper we investigate the application of Evolving Trees for the analysis of mass spectrometric data of bacteria. Evolving Trees are extensions of Self-Organizing Maps developed for hierarchical classification systems. Therefore they are well suited for taxonomic problems like the id ..."
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Abstract. In this paper we investigate the application of Evolving Trees for the analysis of mass spectrometric data of bacteria. Evolving Trees are extensions of Self-Organizing Maps developed for hierarchical classification systems. Therefore they are well suited for taxonomic problems like the identification of bacteria. Here we focus on three topics, an appropriate pre-processing and encoding of the spectra, an adequate data model by means of a hierarchical Evolving Tree and an interpretable visualization. First the high-dimensionality of the data is reduced by a compact representation. Here we employ sparse coding, specifically tailored for the processing of mass spectra. In the second step the topographic information which is expected in the fingerprints is used for advanced tree evaluation and analysis. We adapted the original topographic product for Self-Organizing-Maps for Evolving Trees to achieve a judgment of topography. Additionally we transferred the concept of U-matrix for evaluation of the separability of Self-Organizing-Maps to their analog in Evolving Trees. We demonstrate these extensions for two mass spectrometric data sets of bacteria fingerprints and show their classification and evaluation capabilities in comparison to state of the art techniques. 1.

