Summary. We discuss functional clustering procedures for nested designs, where multiple curves are collected for each subject in the study. We start by considering the application of standard functional clustering tools to this problem, which leads to groupings based on the average profile for each subject. After discussing some of the shortcomings of this approach, we present a mixture model based on a generalization of the nested Dirichlet process that clusters subjects based on the distribution of their curves. By using mixtures of generalized Dirichlet processes, the model induces a much more flexible prior on the partition structure than other popular model-based clustering methods, allowing for different rates of introduction of new clusters as the number of observations increases. The methods are illustrated using hormone profiles from multiple menstrual cycles collected for women in the Early Pregnancy Study.

We consider the specification of prior distributions for Bayesian model comparison, focusing on regression-type models. We propose a particular joint specification of the prior distribution across models so that sensitivity of posterior model probabilities to the dispersion of prior distributions for the parameters of individual models (Lindley’s paradox) is diminished. We illustrate the behavior of inferential and predictive posterior quantities in linear and log-linear regressions under our proposed prior densities with a series of simulated and real data examples.