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Seventeen a-subunit isoforms of Paramecium V-ATPase provide high specialization in localization and function (2006)

by T Wassmer, R Kissmehl, J Cohen, H Plattner
Venue:Mol. Biol. Cell
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A multigene family encoding R-SNAREs in the ciliate Paramecium tetraurelia. Traffic 7

by Christina Schilde, Thomas Wassmer, Helmut Plattner, Snare Proteins (soluble N-ethylmaleimide-sensitive Fac , 2006
"... tor attachment protein receptors) mediate membrane interactions and are conventionally divided into Q-SNAREs and R-SNAREs according to the possession of a glutamine or arginine residue at the core of their SNARE domain. Here, we describe a set of R-SNAREs from the ciliate Paramecium tetraurelia cons ..."
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tor attachment protein receptors) mediate membrane interactions and are conventionally divided into Q-SNAREs and R-SNAREs according to the possession of a glutamine or arginine residue at the core of their SNARE domain. Here, we describe a set of R-SNAREs from the ciliate Paramecium tetraurelia consisting of seven families encoded by 12 genes that are expressed simultaneously. The complexity of the endomembrane system in Paramecium can explain this high number of genes. All P. tetraurelia synaptobrevins (PtSybs) possess a SNARE domain and show homology to the Longin family of R-SNAREs such as Ykt6, Sec22 and tetanus toxin-insensitive VAMP (TI-VAMP). We localized four exemplary PtSyb subfamilies with GFP constructs and antibodies on the light and electron microscopic level. PtSyb1-1, PtSyb1-2 and PtSyb3-1 were found in the endoplasmic reticulum, whereas PtSyb2 is localized exclusively in the contractile vacuole complex. PtSyb6 was found cytosolic but also resides in regularly arranged structures at the cell cortex (parasomal sacs), the cytoproct and oral apparatus, probably representing endocytotic compartments. With gene silencing, we showed that the R-SNARE of the contractile vacuole complex, PtSyb2, functions to maintain structural integrity as well as functionality of the osmoregulatory system but also affects cell division.
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...f PtSyb6-1 were not affinity-purified. The polyclonal rabbit antibody directed against the a1–1 subunit of the V0 part of the Paramecium V-ATPase (anti-PtV0aSU) stains the contractile vacuole complex =-=(90)-=-. Anti-a-tubulin was a mouse monoclonal antibody (clone DM1A; SigmaAldrich, Schnelldorf, Germany) and was used diluted 1:500 in immunostainings. Immunofluorescence labelling and staining with dyes Mon...

Novel Types of Ca 2 � Release Channels Participate in the Secretory Cycle of Paramecium Cells � †

by Paramecium Cells, Eva-maria Ladenburger, Ivonne M. Sehring, Iris Korn, Eva-maria Ladenburger, Ivonne M. Sehring, Iris Korn, Helmut Plattner , 2009
"... This article cites 107 articles, 42 of which can be accessed free ..."
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This article cites 107 articles, 42 of which can be accessed free
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...) or 1:800 (TMP4) for immunostainings and 1:4,000 (TMP1) or 1:8,000 (TMP4) for Western blots, respectively. The polyclonal rabbit Ab directed against V-type H � -ATPase is described in Wassmer et al. =-=(101)-=- (there designated as “anti-a1-1” [P178-S328]) and was used at a concentration of 12 �g/ml in immunostainings. The Ab against �-tubulin was a monoclonal mouse Ab (clone DM1A; Sigma-Aldrich, Schnelldor...

The vacuolar ATPase from Entamoeba histolytica: molecular cloning of the gene encoding for the B subunit and subcellular localization of the protein

by M G Melendez-Hernandez, M L Barrios, E Orozco, J P Luna-Arias - BMC Microbiol , 2008
"... ..."
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...tissue-specific locations [5]. A special case is Paramecium, which contains 17 a subunit isoforms, which provide a specific location and function for V-ATPase in at least seven different compartments =-=[45]-=-. Thus, E. histolytica could have at least two V-ATPase isoforms, one distributed in vacuoles, and the other in the Golgi apparatus that could be more primitive in trophozoites than those from other s...

unknown title

by unknown authors
"... Increases in the concentration of intracellular Ca2+, [Ca2+]i, govern a variety of processes in response to cell stimulation, such as exocytosis and cell contraction. A rise in intracellular Ca2+ may be due to Ca2+ influx from the outside medium or ..."
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Increases in the concentration of intracellular Ca2+, [Ca2+]i, govern a variety of processes in response to cell stimulation, such as exocytosis and cell contraction. A rise in intracellular Ca2+ may be due to Ca2+ influx from the outside medium or
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...o. Immunofluorescence analyses showed that the labeling of the ORS with IP3RN-specific Abs at different stages is reduced, whereas the staining pattern obtained with Abs against the V-type H+-ATPase (=-=Wassmer et al., 2006-=-) is not influenced (Fig. 6A) under these conditions. Similar results could be obtained by analyzing RNA levels by RT-PCR, using primers against an actin isoform (actin8-1) as control. As shown in Fig...

unknown title

by unknown authors
"... Increases in the concentration of intracellular Ca2+, [Ca2+]i, govern a variety of processes in response to cell stimulation, such as exocytosis and cell contraction. A rise in intracellular Ca2+ may be due to Ca2+ influx from the outside medium or ..."
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Increases in the concentration of intracellular Ca2+, [Ca2+]i, govern a variety of processes in response to cell stimulation, such as exocytosis and cell contraction. A rise in intracellular Ca2+ may be due to Ca2+ influx from the outside medium or
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...o. Immunofluorescence analyses showed that the labeling of the ORS with IP3RN-specific Abs at different stages is reduced, whereas the staining pattern obtained with Abs against the V-type H+-ATPase (=-=Wassmer et al., 2006-=-) is not influenced (Fig. 6A) under these conditions. Similar results could be obtained by analyzing RNA levels by RT-PCR, using primers against an actin isoform (actin8-1) as control. As shown in Fig...

unknown title

by unknown authors
"... Actin, an abundant cytoskeletal protein, is of paramount importance in forming the cell cortex, amoeboid movement, cyclosis, vesicle trafficking, cell division and for cell contraction etc. In the past few years, new aspects have ..."
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Actin, an abundant cytoskeletal protein, is of paramount importance in forming the cell cortex, amoeboid movement, cyclosis, vesicle trafficking, cell division and for cell contraction etc. In the past few years, new aspects have
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...be identified unequivocally. The labeling resembles that achieved with the GFP fusion protein of the a8 subunit of the V-ATPase in Paramecium, which was shown to be associated with the Golgi complex (=-=Wassmer et al., 2006-=-). Nuclear and cell division Our observation that the micronuclear cytospindle contains actin4 according to antibody labeling is compatible with a role of actin in nuclear positioning (Starr and Han, ...

Summary

by Ivonne M. Sehring, Christoph Reiner, Jörg Mansfeld, Helmut Plattner , 2006
"... A broad spectrum of actin paralogs in Paramecium tetraurelia cells display differential localization and function ..."
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A broad spectrum of actin paralogs in Paramecium tetraurelia cells display differential localization and function
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...be identified unequivocally. The labeling resembles that achieved with the GFP fusion protein of the a8 subunit of the V-ATPase in Paramecium, which was shown to be associated with the Golgi complex (=-=Wassmer et al., 2006-=-). Nuclear and cell division Our observation that the micronuclear cytospindle contains actin4 according to antibody labeling is compatible with a role of actin in nuclear positioning (Starr and Han, ...

their Assignment to the Different Trafficking Pathways in Paramecium

by Blackwell Munksgaard, Christina Schilde, Carsten Danzer, Kathrin Nuehse, Kaya Lutter
"... These authors contributed equally to this work SNARE proteins have been classified as vesicular (v)- and target (t)-SNAREs and play a central role in the various membrane interactions in eukaryotic cells. Based on the Paramecium genome project, we have identified a multigene family of at least 26 me ..."
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These authors contributed equally to this work SNARE proteins have been classified as vesicular (v)- and target (t)-SNAREs and play a central role in the various membrane interactions in eukaryotic cells. Based on the Paramecium genome project, we have identified a multigene family of at least 26 members encoding the t-SNARE syntaxin (PtSyx) that can be grouped into 15 subfamilies. Paramecium syntaxins match the classical build-up of syntaxins, being ‘tail-anchored ’ membrane proteins with an N-terminal cytoplasmic domain and a membranebound single C-terminal hydrophobic domain. The membrane anchor is preceded by a conserved SNARE domain of 60 amino acids that is supposed to participate in SNARE complex assembly. In a phylogenetic analysis, most of the Paramecium syntaxin genes were found to cluster in groups together with those from other organisms in a pathway-specific manner, allowing an assignment to different compartments in a homology-dependent way. However, some of them seem to have no counterparts in metazoans. In another approach, we fused one representative member of each of the syntaxin isoforms to green fluorescent protein and assessed the in vivo localization, which was further supported by immunolocalization of some syntaxins. This allowed us to assign syntaxins to all important trafficking pathways in Paramecium.
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... same buffer. Cells were dehydrated in ethanol series and embedded in LR-Gold resin (Agar Scientifique, Stansted, UK) according to standard protocols. Sections were incubated with anti-GFP antibodies =-=(102)-=-, followed by protein A bound to colloidal gold particles of 3 or 5 nm size (pA-Au3/5), and stained with aqueous uranyl acetate and analysed, all as previously described (79). Acknowledgments We would...

with the osmoregulatory system

by An Ins, Eva-maria Ladenburger, Iris Korn, Nicole Kasielke, Thomas Wassmer, Helmut Plattner , 2006
"... In the ciliate Paramecium, a variety of well characterized processes are regulated by Ca2+, e.g. exocytosis, endocytosis and ciliary beat. Therefore, among protozoa, Paramecium is considered a model organism for Ca2+ signaling, although the molecular identity of the channels responsible for the Ca2+ ..."
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In the ciliate Paramecium, a variety of well characterized processes are regulated by Ca2+, e.g. exocytosis, endocytosis and ciliary beat. Therefore, among protozoa, Paramecium is considered a model organism for Ca2+ signaling, although the molecular identity of the channels responsible for the Ca2+ signals remains largely unknown. We have cloned – for the first time in a protozoan – the full sequence of the gene encoding a putative inositol (1,4,5)trisphosphate (Ins(1,4,5)P3) receptor from Paramecium tetraurelia cells showing molecular characteristics of higher eukaryotic cells. The homologously expressed Ins(1,4,5)P3binding domain binds [ 3 Summary H]Ins(1,4,5)P3, whereas antibodies unexpectedly localize this protein to the osmoregulatory system. The level of Ins(1,4,5)P3-receptor expression was reduced, as shown on a transcriptional level and by immuno-staining, by decreasing the concentration of
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.... Immunofluorescence analyses showed that the labeling of the ORS with IP3RN-specific Abs at different stages is reduced, whereas the staining pattern obtained with Abs against the V-type H +-ATPase (=-=Wassmer et al., 2006-=-) is not influenced (Fig. 6A) under these conditions. Similar results could be obtained by analyzing RNA levels by RT-PCR, using primers against an actin isoform (actin8-1) as control. As shown in Fig...

BMC Evolutionary Biology BioMed Central

by Raghida Damaj, Sébastien Pomel, Geneviève Bricheux, Gérard Coffe, Bernard Viguès, Viviane Ravet
"... ..."
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...2 topology, a distribution also described for other sets of highly expressed proteins: 35 cGMP-dependent protein kinases [19], 26 syntaxins [20], 12 synaptobrevins [21] and 17 vacuolar-proton-ATPases =-=[22]-=-. Regarding the distribution of the 656 ESTs retrieved from Paramecium DB, one can see that gene expression levels are not evenly scattered over the similarity tree topology. It appears that nodes (Fi...

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