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86,572
Application of Phylogenetic Networks in Evolutionary Studies
 SUBMITTED TO MBE 2005
, 2005
"... The evolutionary history of a set of taxa is usually represented by a phylogenetic tree, and this model has greatly facilitated the discussion and testing of hypotheses. However, it is well known that more complex evolutionary scenarios are poorly described by such models. Further, even when evoluti ..."
Abstract

Cited by 887 (15 self)
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both split networks and reticulate networks, how they are defined and how they can be interpreted. Additionally, the paper outlines the beginnings of a comprehensive statistical framework for applying split network methods. We show how split networks can represent confidence sets of trees and introduce
SplitStream: HighBandwidth Multicast in Cooperative Environments
 SOSP '03
, 2003
"... In treebased multicast systems, a relatively small number of interior nodes carry the load of forwarding multicast messages. This works well when the interior nodes are highly available, d d cated infrastructure routers but it poses a problem for applicationlevel multicast in peertopeer systems. ..."
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Cited by 578 (17 self)
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on an Internet testbed and via largescale network simulation. The results show that SplitStreamd istributes the forward ing load among all peers and can accommod'9 peers with different band0 d capacities while imposing low overhead for forest constructionand maintenance.
SIGNAL RECOVERY BY PROXIMAL FORWARDBACKWARD SPLITTING
 MULTISCALE MODEL. SIMUL. TO APPEAR
"... We show that various inverse problems in signal recovery can be formulated as the generic problem of minimizing the sum of two convex functions with certain regularity properties. This formulation makes it possible to derive existence, uniqueness, characterization, and stability results in a unifi ..."
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Cited by 509 (24 self)
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unified and standardized fashion for a large class of apparently disparate problems. Recent results on monotone operator splitting methods are applied to establish the convergence of a forwardbackward algorithm to solve the generic problem. In turn, we recover, extend, and provide a simplified analysis
A Bayesian method for the induction of probabilistic networks from data
 MACHINE LEARNING
, 1992
"... This paper presents a Bayesian method for constructing probabilistic networks from databases. In particular, we focus on constructing Bayesian belief networks. Potential applications include computerassisted hypothesis testing, automated scientific discovery, and automated construction of probabili ..."
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Cited by 1400 (31 self)
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This paper presents a Bayesian method for constructing probabilistic networks from databases. In particular, we focus on constructing Bayesian belief networks. Potential applications include computerassisted hypothesis testing, automated scientific discovery, and automated construction
The capacity of wireless networks
 IEEE TRANSACTIONS ON INFORMATION THEORY
, 2000
"... When n identical randomly located nodes, each capable of transmitting at bits per second and using a fixed range, form a wireless network, the throughput @ A obtainable by each node for a randomly chosen destination is 2 bits per second under a noninterference protocol. If the nodes are optimally p ..."
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Cited by 3243 (42 self)
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When n identical randomly located nodes, each capable of transmitting at bits per second and using a fixed range, form a wireless network, the throughput @ A obtainable by each node for a randomly chosen destination is 2 bits per second under a noninterference protocol. If the nodes are optimally
Bayesian Network Classifiers
, 1997
"... Recent work in supervised learning has shown that a surprisingly simple Bayesian classifier with strong assumptions of independence among features, called naive Bayes, is competitive with stateoftheart classifiers such as C4.5. This fact raises the question of whether a classifier with less restr ..."
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Cited by 796 (20 self)
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restrictive assumptions can perform even better. In this paper we evaluate approaches for inducing classifiers from data, based on the theory of learning Bayesian networks. These networks are factored representations of probability distributions that generalize the naive Bayesian classifier and explicitly
Maxmargin Markov networks
, 2003
"... In typical classification tasks, we seek a function which assigns a label to a single object. Kernelbased approaches, such as support vector machines (SVMs), which maximize the margin of confidence of the classifier, are the method of choice for many such tasks. Their popularity stems both from the ..."
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Cited by 604 (15 self)
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In typical classification tasks, we seek a function which assigns a label to a single object. Kernelbased approaches, such as support vector machines (SVMs), which maximize the margin of confidence of the classifier, are the method of choice for many such tasks. Their popularity stems both from
Resilient Overlay Networks
, 2001
"... A Resilient Overlay Network (RON) is an architecture that allows distributed Internet applications to detect and recover from path outages and periods of degraded performance within several seconds, improving over today’s widearea routing protocols that take at least several minutes to recover. A R ..."
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Cited by 1160 (31 self)
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A Resilient Overlay Network (RON) is an architecture that allows distributed Internet applications to detect and recover from path outages and periods of degraded performance within several seconds, improving over today’s widearea routing protocols that take at least several minutes to recover. A
A Strategic Model of Social and Economic Networks
 CMSEMS Discussion Paper 1098, Northwestern University, revised
, 1995
"... We study the stability and efficiency of social and economic networks, when selfinterested individuals can form or sever links. First, for two stylized models, we characterize the stable and efficient networks. There does not always exist a stable network that is efficient. Next, we show that this t ..."
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Cited by 664 (22 self)
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that this tension persists generally: to assure that there exists a stable network that is efficient, one is forced to allocate resources to nodes that are not responsible for any of the production. We characterize one such allocation rule: the equal split rule, and another rule that arises naturally from
Evolving Neural Networks through Augmenting Topologies
 Evolutionary Computation
"... An important question in neuroevolution is how to gain an advantage from evolving neural network topologies along with weights. We present a method, NeuroEvolution of Augmenting Topologies (NEAT), which outperforms the best fixedtopology method on a challenging benchmark reinforcement learning task ..."
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Cited by 536 (112 self)
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An important question in neuroevolution is how to gain an advantage from evolving neural network topologies along with weights. We present a method, NeuroEvolution of Augmenting Topologies (NEAT), which outperforms the best fixedtopology method on a challenging benchmark reinforcement learning
Results 1  10
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