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Statistical Evaluation of a Bottom-Up Clustering for Single Particle Molecular Images

by Yukio Shimonohara Kiyoshi Asai
"... We examined the statistical performance of clustering single particle molecular images by bottom-up clustering, a hierarchical algorithm, using simulated protein images with a low signalto-noise ratio. Using covariance for the measure of similarity together with the iterative alignment, our method w ..."
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We examined the statistical performance of clustering single particle molecular images by bottom-up clustering, a hierarchical algorithm, using simulated protein images with a low signalto-noise ratio. Using covariance for the measure of similarity together with the iterative alignment, our method

Predictive Top-Down Knowledge Improves Neural Exploratory Bottom-Up Clustering

by Chihli Hung, Stefan Wermter, Peter Smith
"... In this paper, we explore the hypothesis that integrating symbolic top-down knowledge into text vector representations can improve neural exploratory bottom-up representations for text clustering. By extracting semantic rules from WordNet, terms with similar concepts are substituted with a more ..."
Abstract - Cited by 2 (0 self) - Add to MetaCart
In this paper, we explore the hypothesis that integrating symbolic top-down knowledge into text vector representations can improve neural exploratory bottom-up representations for text clustering. By extracting semantic rules from WordNet, terms with similar concepts are substituted with a more

A bottom-up clustering algorithm to detect ncRNA molecules with a

by Yair Horesh, Ron Unger
"... common secondary structure ..."
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common secondary structure

Statistical Evaluation of a Bottom-Up Clustering for Single Particle Molecular Images

by Yutaka Uenol, Katsunori Katsutoshi Takahashi, Yukio ~himonohara'~ Kiyoshi Asai
"... uenoyt0ni.aist.go.jp isono0cbx-c. jp sltaka0cbrc. jp ..."
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uenoyt0ni.aist.go.jp isono0cbx-c. jp sltaka0cbrc. jp

A Parallel Bottom-up Clustering Algorithm with Applications to Circuit Partitioning in VLSI Design

by Jason Cong, M'Lissa Smith - In Proc. ACM/IEEE Design Automation Conference , 1993
"... In this paper, we present a bottom-up clustering algorithm based on recursive collapsing of small cliques in a graph. The sizes of the small cliques are derived using random graph theory. This clustering algorithm leads to a natural parallel implementation in which multiple processors are used to id ..."
Abstract - Cited by 67 (10 self) - Add to MetaCart
In this paper, we present a bottom-up clustering algorithm based on recursive collapsing of small cliques in a graph. The sizes of the small cliques are derived using random graph theory. This clustering algorithm leads to a natural parallel implementation in which multiple processors are used

Speaker Diarization using bottom-up clustering based on a Parameter-derived Distance between adapted GMMs

by Mathieu Ben, Michaël Betser, Frédéric Bimbot, Guillaume Gravier - in "Intl. Conf. on Speech and Language Processing , 2004
"... In this paper, we present an approach for speaker diarization based on segmentation followed by bottom-up clustering, where clusters are modeled using adapted Gaussian mixture models. We propose a novel inter-cluster distance in the model parameter space which is easily computable and which can both ..."
Abstract - Cited by 25 (2 self) - Add to MetaCart
In this paper, we present an approach for speaker diarization based on segmentation followed by bottom-up clustering, where clusters are modeled using adapted Gaussian mixture models. We propose a novel inter-cluster distance in the model parameter space which is easily computable and which can

Linguistic influences on bottom-up and top-down clustering for speaker diarization

by Simon Bozonnet, Dong Wang, Nicholas Evans - in Proc. Int. Conf. Acoustics, Speech, Signal Processing (ICASSP
"... While bottom-up approaches have emerged as the standard, default approach to clustering for speaker diarization we have always found the top-down approach gives equivalent or superior performance. Our recent work shows that significant gains in performance can be obtained when cluster purification i ..."
Abstract - Cited by 3 (3 self) - Add to MetaCart
While bottom-up approaches have emerged as the standard, default approach to clustering for speaker diarization we have always found the top-down approach gives equivalent or superior performance. Our recent work shows that significant gains in performance can be obtained when cluster purification

Bottom-up Segmentation for Top-down Detection

by Sanja Fidler , Roozbeh Mottaghi , Alan Yuille , Raquel Urtasun
"... In this paper we are interested in how semantic segmentation can help object detection. Towards this goal, we propose a novel deformable part-based model which exploits region-based segmentation algorithms that compute candidate object regions by bottom-up clustering followed by ranking of those reg ..."
Abstract - Cited by 30 (8 self) - Add to MetaCart
In this paper we are interested in how semantic segmentation can help object detection. Towards this goal, we propose a novel deformable part-based model which exploits region-based segmentation algorithms that compute candidate object regions by bottom-up clustering followed by ranking of those

Edge Separability Based Circuit Clustering with Application to Circuit Partitioning

by Jason Cong, Sung Kyu Lim - IEEE/ACM Asia South Pacific Design Automation Conference , 2000
"... In this paper, we introduce a new efficient O(n log n) graph search based bottom-up clustering algorithm named ESC (Edge Separability based Clustering). Unlike existing bottom-up algorithms that are based on local connectivity information of the netlist, ESC exploits more global connectivity inform ..."
Abstract - Cited by 45 (23 self) - Add to MetaCart
In this paper, we introduce a new efficient O(n log n) graph search based bottom-up clustering algorithm named ESC (Edge Separability based Clustering). Unlike existing bottom-up algorithms that are based on local connectivity information of the netlist, ESC exploits more global connectivity

ProtoNet: hierarchical classification of the protein space

by Ori Sasson, Avishay Vaaknin, Hillel Fleischer, Elon Portugaly, Yonatan Bilu, Nathan Linial, Michal Linial - Nucleic Acids Res , 2003
"... The ProtoNet site provides an automatic hierarchical clustering of the SWISS-PROT protein database. The clustering is based on an all-against-all BLAST similarity search. The similarities ’ E-score is used to perform a continuous bottom-up clustering process by applying alternative rules for merging ..."
Abstract - Cited by 39 (12 self) - Add to MetaCart
The ProtoNet site provides an automatic hierarchical clustering of the SWISS-PROT protein database. The clustering is based on an all-against-all BLAST similarity search. The similarities ’ E-score is used to perform a continuous bottom-up clustering process by applying alternative rules
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