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154,633
Parallelized preprocessing algorithms for highdensity oligonucleotide arrays
"... Studies of gene expression using highdensity oligonucleotide microarrays have become standard in a variety of biological contexts. The data recorded using the microarray technique are characterized by high levels of noise and bias. These failures have to be removed, therefore preprocessing of raw d ..."
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Cited by 6 (6 self)
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be used. For parallelization on multicomputers, the communication protocol MPI (Message Passing Interface) and the R language will be used. This paper proposes the new R language package affyPara for parallelized preprocessing of highdensity oligonucleotide microarray data. Partition of data could
Fast Parallel Algorithms for ShortRange Molecular Dynamics
 JOURNAL OF COMPUTATIONAL PHYSICS
, 1995
"... Three parallel algorithms for classical molecular dynamics are presented. The first assigns each processor a fixed subset of atoms; the second assigns each a fixed subset of interatomic forces to compute; the third assigns each a fixed spatial region. The algorithms are suitable for molecular dyn ..."
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Cited by 622 (6 self)
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Three parallel algorithms for classical molecular dynamics are presented. The first assigns each processor a fixed subset of atoms; the second assigns each a fixed subset of interatomic forces to compute; the third assigns each a fixed spatial region. The algorithms are suitable for molecular
Parallel discrete event simulation
, 1990
"... Parallel discrete event simulation (PDES), sometimes I called distributed simulation, refers to the execution of a single discrete event simulation program on a parallel computer. PDES has attracted a considerable amount of interest in recent years. From a pragmatic standpoint, this interest arises ..."
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Cited by 817 (40 self)
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Parallel discrete event simulation (PDES), sometimes I called distributed simulation, refers to the execution of a single discrete event simulation program on a parallel computer. PDES has attracted a considerable amount of interest in recent years. From a pragmatic standpoint, this interest arises
Planning Algorithms
, 2004
"... This book presents a unified treatment of many different kinds of planning algorithms. The subject lies at the crossroads between robotics, control theory, artificial intelligence, algorithms, and computer graphics. The particular subjects covered include motion planning, discrete planning, planning ..."
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Cited by 1111 (53 self)
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This book presents a unified treatment of many different kinds of planning algorithms. The subject lies at the crossroads between robotics, control theory, artificial intelligence, algorithms, and computer graphics. The particular subjects covered include motion planning, discrete planning
Parallel Numerical Linear Algebra
, 1993
"... We survey general techniques and open problems in numerical linear algebra on parallel architectures. We first discuss basic principles of parallel processing, describing the costs of basic operations on parallel machines, including general principles for constructing efficient algorithms. We illust ..."
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Cited by 773 (26 self)
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We survey general techniques and open problems in numerical linear algebra on parallel architectures. We first discuss basic principles of parallel processing, describing the costs of basic operations on parallel machines, including general principles for constructing efficient algorithms. We
Data Streams: Algorithms and Applications
, 2005
"... In the data stream scenario, input arrives very rapidly and there is limited memory to store the input. Algorithms have to work with one or few passes over the data, space less than linear in the input size or time significantly less than the input size. In the past few years, a new theory has emerg ..."
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Cited by 543 (23 self)
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In the data stream scenario, input arrives very rapidly and there is limited memory to store the input. Algorithms have to work with one or few passes over the data, space less than linear in the input size or time significantly less than the input size. In the past few years, a new theory has
Survey of clustering algorithms
 IEEE TRANSACTIONS ON NEURAL NETWORKS
, 2005
"... Data analysis plays an indispensable role for understanding various phenomena. Cluster analysis, primitive exploration with little or no prior knowledge, consists of research developed across a wide variety of communities. The diversity, on one hand, equips us with many tools. On the other hand, the ..."
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Cited by 483 (4 self)
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, the profusion of options causes confusion. We survey clustering algorithms for data sets appearing in statistics, computer science, and machine learning, and illustrate their applications in some benchmark data sets, the traveling salesman problem, and bioinformatics, a new field attracting intensive efforts
An Algorithm for Tracking Multiple Targets
 IEEE Transactions on Automatic Control
, 1979
"... Abstract—An algorithm for tracking multiple targets In a cluttered algorithms. Clustering is the process of dividing the entire environment Is developed. The algorithm Is capable of Initiating tracks, set of targets and measurements into independent groups accounting for false or m[~clngreports, and ..."
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Cited by 587 (0 self)
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Abstract—An algorithm for tracking multiple targets In a cluttered algorithms. Clustering is the process of dividing the entire environment Is developed. The algorithm Is capable of Initiating tracks, set of targets and measurements into independent groups accounting for false or m
Suffix arrays: A new method for online string searches
, 1991
"... A new and conceptually simple data structure, called a suffix array, for online string searches is introduced in this paper. Constructing and querying suffix arrays is reduced to a sort and search paradigm that employs novel algorithms. The main advantage of suffix arrays over suffix trees is that ..."
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Cited by 828 (0 self)
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A new and conceptually simple data structure, called a suffix array, for online string searches is introduced in this paper. Constructing and querying suffix arrays is reduced to a sort and search paradigm that employs novel algorithms. The main advantage of suffix arrays over suffix trees
The geometry of algorithms with orthogonality constraints
 SIAM J. MATRIX ANAL. APPL
, 1998
"... In this paper we develop new Newton and conjugate gradient algorithms on the Grassmann and Stiefel manifolds. These manifolds represent the constraints that arise in such areas as the symmetric eigenvalue problem, nonlinear eigenvalue problems, electronic structures computations, and signal proces ..."
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Cited by 649 (1 self)
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In this paper we develop new Newton and conjugate gradient algorithms on the Grassmann and Stiefel manifolds. These manifolds represent the constraints that arise in such areas as the symmetric eigenvalue problem, nonlinear eigenvalue problems, electronic structures computations, and signal
Results 1  10
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154,633